RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 OR4K15Q8NH41 348 aa10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 GLYATL2Q8WU03 294 aa10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 CNTNAP3BQ96NU0 1288 aa10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 PPA2Q9H2U2 334 aa10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 SPNS1Q9H2V7 528 aa10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 EMC7Q9NPA0 242 aa10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 PISDQ9UG56 409 aa10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 TMEFF2Q9UIK5 374 aaPredicted RBP10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 POU2F3Q9UKI9 436 aa10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 MCM3APO60318 1980 aa10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 CNOT4O95628 575 aaKnown RBP10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 APOBEC1P41238 236 aaKnown RBP10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 PPP2CBP62714 309 aa10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 PPP2CAP67775 309 aa10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 ARG2P78540 354 aa10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 FCN2Q15485 313 aa10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 EXOSC6Q5RKV6 272 aaKnown RBP10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 PGAP1Q75T13 922 aa10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 OPALINQ96PE5 141 aa10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 TSPAN10Q9H1Z9 355 aaPredicted RBP10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 GPR55Q9Y2T6 319 aaPredicted RBP10.89□□□□□ -0.67
DEPDC1-201ENST00000370966 A0A0A6YYD5 115 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 PRAMEF25A6NGN4 478 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 GPR171O14626 319 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 SELENOFO60613 162 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 DDAH2O95865 285 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 TK1P04183 234 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 CALCBP10092 127 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 GCH1P30793 250 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 HTR5AP47898 357 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 VEGFCP49767 419 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 MTCP1P56278 107 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 RPS27AP62979 156 aaKnown RBP10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 UBA52P62987 128 aaKnown RBP10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 GABREP78334 506 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 CD276Q5ZPR3 534 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 PLCXD3Q63HM9 321 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 CA13Q8N1Q1 262 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 TMEM99Q8N816 258 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 ANKRD53Q8N9V6 530 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 TMEM185AQ8NFB2 350 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 SGCZQ96LD1 299 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 SULT4A1Q9BR01 284 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 ARHGAP9Q9BRR9 750 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 PBX4Q9BYU1 374 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 NRSN2Q9GZP1 204 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 ZNF286AQ9HBT8 521 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 OR52A1Q9UKL2 312 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 RAB22AQ9UL26 194 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 MRPS28Q9Y2Q9 187 aaKnown RBP10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 COL5A3P25940 1745 aaPredicted RBP10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 GABARAPH6UMI1 98 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 CHRM2P08172 466 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 LIPCP11150 499 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 NFYAP23511 347 aaPredicted RBP10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 CTGFP29279 349 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 SSTR2P30874 369 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 SDHAP31040 664 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 CASP6P55212 293 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 SEC61A1P61619 476 aaKnown RBP10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 NKAIN2Q5VXU1 208 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 STK35Q8TDR2 534 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 WDR34Q96EX3 536 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 PHF7Q9BWX1 381 aaPredicted RBP10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 SELENOIQ9C0D9 397 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 MCOLN1Q9GZU1 580 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 SLC38A1Q9H2H9 487 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 PADI1Q9ULC6 663 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 KCNE1BA0A087WTH5 132 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 CPT2P23786 658 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 MZT1Q08AG7 82 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 POU4F3Q15319 338 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 GLYATL3Q5SZD4 288 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 PAQR6Q6TCH4 344 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 ADGRE4PQ86SQ3 457 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 PIGCQ92535 297 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 EID2BQ96D98 161 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 RNF167Q9H6Y7 350 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 FKRPQ9H9S5 495 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 SLC6A13Q9NSD5 602 aa10.88□□□□□ -0.67
DEPDC1-201ENST00000370966 A0A1W2PPC4 97 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 TRAPPC2LH3BP13 241 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 ZNF254O75437 659 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 NAGAP17050 411 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 SPI1P17947 270 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 ZNF93P35789 620 aaPredicted RBP10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 CAPZBP47756 277 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 WNT3P56703 355 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 OR1D5P58170 312 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 SLC14A1Q13336 389 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 OPCMLQ14982 345 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 LILRB2Q8N423 598 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 BCORP1Q8N888 145 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 CCL4L1Q8NHW4 92 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 NT5CQ8TCD5 201 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 ELF4Q99607 663 aaPredicted RBP10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 PIGQQ9BRB3 760 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 LAT2Q9GZY6 243 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 CHRNA9Q9UGM1 479 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 COL4A1P02462 1669 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms