RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 CD40P25942 277 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 HOXC12P31275 282 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 MAGEA2P43356 314 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 TUBA1BP68363 451 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 TUBA4AP68366 448 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 SPIBQ01892 262 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 HIST3H3Q16695 136 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 ANKDD1AQ495B1 522 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 DNAL1Q4LDG9 190 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 TUBA1AQ71U36 451 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 ZNF627Q7L945 461 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 RRM2BQ7LG56 351 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 IGFN1Q86VF2 1251 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 CDK20Q8IZL9 346 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 IGFBPL1Q8WX77 278 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 AKAP1Q92667 903 aaKnown RBP eCLIP19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 MBD6Q96DN6 1003 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 BTBD10Q9BSF8 475 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 TXNIPQ9H3M7 391 aa19.59■□□□□ 0.73
ECHDC1-203ENST00000368291 ZNF503-AS2A6NEH8 195 aa19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 M0R1B8 84 aa19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 ABCD4O14678 606 aa19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 HS3ST1O14792 307 aa19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 TRMUO75648 421 aaKnown RBP19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 WNT11O96014 354 aa19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 IGHMP01871 453 aa19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 HOXB1P14653 301 aaPredicted RBP19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 RRM2P31350 389 aa19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 SPOCK1Q08629 439 aa19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 KEAP1Q14145 624 aa19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 KLHL24Q6TFL4 600 aa19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 TMEM108Q6UXF1 575 aa19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 ZNF347Q96SE7 839 aa19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 GPA33Q99795 319 aa19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 MAGIXQ9H6Y5 334 aa19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 TMEM5Q9Y2B1 443 aa19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 MAGED1Q9Y5V3 778 aaPredicted RBP19.58■□□□□ 0.73
ECHDC1-203ENST00000368291 MCIDASD6RGH6 385 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 PTP4A3O75365 173 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 IGHG1P01857 330 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 ACADSP16219 412 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 PTAFRP25105 342 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 DAP3P51398 398 aaKnown RBP19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 SMIM11AP58511 58 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 CTXN1P60606 82 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 TRAP1Q12931 704 aaKnown RBP19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 ZBED5Q49AG3 693 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 KLHL17Q6TDP4 642 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 NOXO1Q8NFA2 376 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 HDAC2Q92769 488 aaKnown RBP19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 CRNNQ9UBG3 495 aaPredicted RBP19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 ZNF346Q9UL40 294 aaKnown RBP19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 EDARQ9UNE0 448 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 SIGLEC7Q9Y286 467 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 FXYD6P3P58550 94 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 UBE2NP61088 152 aaKnown RBP19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 ZNF672Q499Z4 452 aaPredicted RBP19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 ZER1Q7Z7L7 766 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 ZNF611Q8N823 705 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 SYT14Q8NB59 555 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 MCHR2Q969V1 340 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 NMD3Q96D46 503 aaKnown RBP19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 ALPK1Q96QP1 1244 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 FOXB1Q99853 325 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 ZNF224Q9NZL3 707 aa19.57■□□□□ 0.72
ECHDC1-203ENST00000368291 ARID1AO14497 2285 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 CENPBD1B2RD01 187 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 DNAJC8O75937 253 aaPredicted RBP19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 QDPRP09417 244 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 ZNF133P52736 654 aaPredicted RBP19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 HMGA2P52926 109 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 ART1P52961 327 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 CLRN1P58418 232 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 RPL27P61353 136 aaKnown RBP19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 MYBPC1Q00872 1141 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 TOP3AQ13472 1001 aaPredicted RBP19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 TAF11Q15544 211 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 DEFB113Q30KQ7 82 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 ZNF813Q6ZN06 617 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 C20orf204Q6ZNR8 217 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 PIAS4Q8N2W9 510 aaPredicted RBP19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 ZNF519Q8TB69 540 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 TSPAN32Q96QS1 320 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 KCNK17Q96T54 332 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 FOXC2Q99958 501 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 CADM1Q9BY67 442 aaKnown RBP19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 CXXC4Q9H2H0 198 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 B3GNT2Q9NY97 397 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 POFUT2Q9Y2G5 429 aa19.56■□□□□ 0.72
ECHDC1-203ENST00000368291 IGHV1-18A0A0C4DH31 117 aa19.55■□□□□ 0.72
ECHDC1-203ENST00000368291 GSC2O15499 205 aa19.55■□□□□ 0.72
ECHDC1-203ENST00000368291 DHHO43323 396 aa19.55■□□□□ 0.72
ECHDC1-203ENST00000368291 IGKV3-15P01624 115 aa19.55■□□□□ 0.72
ECHDC1-203ENST00000368291 IGLV1-44P01699 117 aa19.55■□□□□ 0.72
ECHDC1-203ENST00000368291 B4GALT1P15291 398 aa19.55■□□□□ 0.72
ECHDC1-203ENST00000368291 HDDC2Q7Z4H3 204 aa19.55■□□□□ 0.72
ECHDC1-203ENST00000368291 MYPOPQ86VE0 399 aaPredicted RBP19.55■□□□□ 0.72
ECHDC1-203ENST00000368291 KATNB1Q9BVA0 655 aa19.55■□□□□ 0.72
ECHDC1-203ENST00000368291 NOX3Q9HBY0 568 aa19.55■□□□□ 0.72
ECHDC1-203ENST00000368291 MGAT4BQ9UQ53 548 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms