RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 MRGPRGQ86SM5 289 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 ZNF610Q8N9Z0 462 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 SYT14Q8NB59 555 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 HDAC2Q92769 488 aaKnown RBP13.14□□□□□ -0.31
CCNE1-202ENST00000357943 ZNF566Q969W8 418 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 GABARAPL3Q9BY60 117 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 MRPL13Q9BYD1 178 aaKnown RBP13.14□□□□□ -0.31
CCNE1-202ENST00000357943 SLCO5A1Q9H2Y9 848 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 TOR3AQ9H497 397 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 SLC7A10Q9NS82 523 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 ORC6Q9Y5N6 252 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 DIDO1Q9BTC0 2240 aaKnown RBP13.14□□□□□ -0.31
CCNE1-202ENST00000357943 H7C1C5 153 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 ARHGEF9O43307 516 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 SLC43A1O75387 559 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 TXNDC12O95881 172 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 IGHG1P01857 330 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 SMSP52788 366 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 LCN6P62502 163 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 MYBPC1Q00872 1141 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 KRR1Q13601 381 aaKnown RBP13.13□□□□□ -0.31
CCNE1-202ENST00000357943 GPR139Q6DWJ6 353 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 IZUMO2Q6UXV1 221 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 PTCHD4Q6ZW05 846 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 OR4K13Q8NH42 304 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 ITLN2Q8WWU7 325 aaPredicted RBP13.13□□□□□ -0.31
CCNE1-202ENST00000357943 ALKBH3Q96Q83 286 aaPredicted RBP13.13□□□□□ -0.31
CCNE1-202ENST00000357943 MBOAT4Q96T53 435 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 KCNK17Q96T54 332 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 JKAMPQ9P055 326 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 ENOPH1Q9UHY7 261 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 FOXD3Q9UJU5 478 aaPredicted RBP13.13□□□□□ -0.31
CCNE1-202ENST00000357943 NCOA6Q14686 2063 aaPredicted RBP13.13□□□□□ -0.31
CCNE1-202ENST00000357943 ZAR1LA6NP61 321 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 A8MXE2 369 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 XKRYO14609 159 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 SLC2A10O95528 541 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 RNF224P0DH78 156 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 CDKN2AP42771 156 aaKnown RBP13.13□□□□□ -0.31
CCNE1-202ENST00000357943 DBPQ10586 325 aaPredicted RBP13.13□□□□□ -0.31
CCNE1-202ENST00000357943 ZNF362Q5T0B9 420 aaPredicted RBP13.13□□□□□ -0.31
CCNE1-202ENST00000357943 ZNF474Q6S9Z5 364 aaPredicted RBP13.13□□□□□ -0.31
CCNE1-202ENST00000357943 LINGO2Q7L985 606 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 C20orf196Q8IYI0 205 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 UBE2J2Q8N2K1 259 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 PACRGLQ8N7B6 248 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 SDR9C7Q8NEX9 313 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 NOXO1Q8NFA2 376 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 OR52E2Q8NGJ4 325 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 LILRB4Q8NHJ6 448 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 CA5BP1Q8WTZ4 195 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 ASB5Q8WWX0 329 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 LRR1Q96L50 414 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 NMNAT3Q96T66 252 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 MYCBPQ99417 103 aaPredicted RBP13.13□□□□□ -0.31
CCNE1-202ENST00000357943 ZNF184Q99676 751 aaPredicted RBP13.13□□□□□ -0.31
CCNE1-202ENST00000357943 PIGMQ9H3S5 423 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 SLC25A19Q9HC21 320 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 C8orf4Q9NR00 106 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 SMPD3Q9NY59 655 aaPredicted RBP13.13□□□□□ -0.31
CCNE1-202ENST00000357943 MALT1Q9UDY8 824 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 BAIAP2Q9UQB8 552 aa13.13□□□□□ -0.31
CCNE1-202ENST00000357943 FREM1Q5H8C1 2179 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 A6NIZ1 184 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 FAM90A27PA6NNH2 459 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 VGLL3A8MV65 326 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 M0R3G1 203 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 MSTNO14793 375 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 IDH3BO43837 385 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 AGFG2O95081 481 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 CDH2P19022 906 aaPredicted RBP13.12□□□□□ -0.31
CCNE1-202ENST00000357943 CSNK1A1P48729 337 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 FOXG1P55316 489 aaPredicted RBP13.12□□□□□ -0.31
CCNE1-202ENST00000357943 CLRN1P58418 232 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 RAP1BP61224 184 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 RAP1AP62834 184 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 CD47Q08722 323 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 FAPQ12884 760 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 HIST3H3Q16695 136 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 FBXW9Q5XUX1 488 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 FAM205BPQ63HN1 556 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 HDDC2Q7Z4H3 204 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 OR6N1Q8NGY5 312 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 TMEM54Q969K7 222 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 ZNF837Q96EG3 531 aaPredicted RBP13.12□□□□□ -0.31
CCNE1-202ENST00000357943 GRIP2Q9C0E4 1043 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 GLTPQ9NZD2 209 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 UPB1Q9UBR1 384 aa13.12□□□□□ -0.31
CCNE1-202ENST00000357943 IGKV1D-43A0A0B4J1Z2 117 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 PRSS37A4D1T9 235 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 NKX2-6A6NCS4 301 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 KRT33AO76009 404 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 AQP4P55087 323 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 FMODQ06828 376 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.11□□□□□ -0.31
CCNE1-202ENST00000357943 LEG1Q6P5S2 330 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 LRFN4Q6PJG9 635 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 XKRXQ6PP77 449 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 Q6ZT83 130 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 GABRG1Q8N1C3 465 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms