RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 CNR1P21554 472 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 ZNF93P35789 620 aaPredicted RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 FBXO46Q6PJ61 603 aaPredicted RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 ZFPM2Q8WW38 1151 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 ASB11Q8WXH4 323 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 OR52A1Q9UKL2 312 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 OR6C76A6NM76 312 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 ARPC3O15145 178 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 CACNG3O60359 315 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 LGI1O95970 557 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 MRPS21P82921 87 aaKnown RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 RPE65Q16518 533 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 OR13C9Q8NGT0 318 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 OR2G3Q8NGZ4 309 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 TVP23CQ96ET8 276 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 MOB1AQ9H8S9 216 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 A0A087WZY1 265 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 M0QZ24 198 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 OR13C7P0DN81 318 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 SOX4Q06945 474 aaPredicted RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 IL10RAQ13651 578 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 TIGD3Q6B0B8 471 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 WASH6PQ9NQA3 447 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 MOKQ9UQ07 419 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 IAH1Q2TAA2 248 aaPredicted RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 MDGA2Q7Z553 956 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 FAM96BQ9Y3D0 163 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 WNT7BP56706 349 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 CLDN12P56749 244 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 ZMAT1Q5H9K5 638 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 ENTHD1Q8IYW4 607 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 C11orf40Q8WZ69 217 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 VPS25Q9BRG1 176 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 LANCL2Q9NS86 450 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 HCFC1R1Q9NWW0 138 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 PREX1Q8TCU6 1659 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 H7C1C5 153 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 ELAVL4P26378 380 aaKnown RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 LCN6P62502 163 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 HBA1P69905 142 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 PIWIL3Q7Z3Z3 882 aaKnown RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 OR6V1Q8N148 313 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 EDAQ92838 391 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 ZDHHC16Q969W1 377 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 CTRCQ99895 268 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 AKAP6Q13023 2319 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 CSF3P09919 207 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 FECHP22830 423 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 GABRB3P28472 473 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 STEAP1BQ6NZ63 245 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 OR51A4Q8NGJ6 313 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 OR51A2Q8NGJ7 313 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 AKR1E2Q96JD6 320 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 ACSS1Q9NUB1 689 aaPredicted RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 MDC1Q14676 2089 aaKnown RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 ADAM12O43184 909 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 AMTP48728 403 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 NTMT1Q9BV86 223 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 AQP7P3A6NL99 342 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 GPRIN2O60269 458 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 SORBS2O94875 1100 aaKnown RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 MED9Q9NWA0 146 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 MRPL22Q9NWU5 206 aaKnown RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 GAR1Q9NY12 217 aaKnown RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 SNNO75324 88 aaPredicted RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 TNFRSF17Q02223 184 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 SLC35A4Q96G79 324 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 SEC22CQ9BRL7 303 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 PPP1R3CQ9UQK1 317 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 LOC100289279A0A1B0GTE1 492 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 SERINC4A6NH21 518 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 YKT6O15498 198 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 CYTIPO60759 359 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 AIFM1O95831 613 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 SNRPBP14678 240 aaKnown RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 PM20D1Q6GTS8 502 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 ABCC6O95255 1503 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 LINC00346Q8IVM7 164 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 BORCS6Q96GS4 357 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 AMBRA1Q9C0C7 1298 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 NXT1Q9UKK6 140 aaKnown RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 GLCEO94923 617 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 PRLHRP49683 370 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 PRDX1Q06830 199 aaKnown RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 SSX9Q7RTT3 188 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 PARP16Q8N5Y8 322 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 MFSD9Q8NBP5 474 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 GJC3Q8NFK1 279 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 GPR150Q8NGU9 434 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 SFT2D1Q8WV19 159 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 THOC3Q96J01 351 aaKnown RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 CDCP1Q9H5V8 836 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 ZCWPW2A0A1B0GU75 182 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 RPS23P62266 143 aaKnown RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 CPEB2Q7Z5Q1 589 aaKnown RBP5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 FGF13Q92913 245 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 SEMA4CQ9C0C4 833 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 RAB6CQ9H0N0 254 aa5.35□□□□□ -1.55
SRGAP1-201ENST00000355086 RYDENQ9NUL5 291 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms