RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 C1QL1O75973 258 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 YES1P07947 543 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 PGA4P0DJD7 388 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 PGA3P0DJD8 388 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 GLI4P10075 376 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 FCGR2AP12318 317 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 AGTR1P30556 359 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 SNRPGP62308 76 aaKnown RBP16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 PLBD1Q6P4A8 553 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 AAED1Q7RTV5 226 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 THAP5Q7Z6K1 395 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 DEPDC4Q8N2C3 294 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 OR8J1Q8NGP2 316 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 OR9Q1Q8NGQ5 310 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 TMEM45BQ96B21 275 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 INTS12Q96CB8 462 aaKnown RBP16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 NMD3Q96D46 503 aaKnown RBP16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 PLEKHA8Q96JA3 519 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 TSSK2Q96PF2 358 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 DNAJC27Q9NZQ0 273 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 IGKV1D-43A0A0B4J1Z2 117 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 SLC22A23A1A5C7 686 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 PRSS37A4D1T9 235 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 A6NIZ1 184 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 ZNF726A6NNF4 738 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 DCTN6O00399 190 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 GPR171O14626 319 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 IFNGP01579 166 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 RAP1BP61224 184 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 RAP1AP62834 184 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 FMODQ06828 376 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 CDK5R2Q13319 367 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 SMN1Q16637 294 aaKnown RBP16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 AADACL4Q5VUY2 407 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 GTF2IRD2BQ6EKJ0 949 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 B3GNT6Q6ZMB0 384 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 CXXC5Q7LFL8 322 aaKnown RBP16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 GTF2IRD2Q86UP8 949 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 JAZF1Q86VZ6 243 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 FAM26EQ8N5C1 309 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 NAXEQ8NCW5 288 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 SETD9Q8NE22 299 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 OTULINQ96BN8 352 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 SLC25A44Q96H78 314 aaPredicted RBP16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 GMPPAQ96IJ6 420 aaPredicted RBP16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 TTYH2Q9BSA4 534 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 TEX12Q9BXU0 123 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 NMNAT2Q9BZQ4 307 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 VSX1Q9NZR4 365 aaPredicted RBP16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 NOSIPQ9Y314 301 aaKnown RBP16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 HSPE1-MOB4S4R3N1 261 aa16.83■□□□□ 0.28
CHMP4A-201ENST00000347519 XKRYO14609 159 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 ENTPD6O75354 484 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 GYPBP06028 91 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 HOXD4P09016 255 aaPredicted RBP16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 ZNF3P17036 446 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 FMO3P31513 532 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 KIR2DL2P43627 348 aaPredicted RBP16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 SIRPAP78324 504 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 SF3B4Q15427 424 aaKnown RBP eCLIP16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 FAM205BPQ63HN1 556 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 ADCK1Q86TW2 530 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 C20orf196Q8IYI0 205 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 ZNF843Q8N446 348 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 NOXO1Q8NFA2 376 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 TRUB1Q8WWH5 349 aaKnown RBP16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 TMEM54Q969K7 222 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 LRR1Q96L50 414 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 ADAD1Q96M93 576 aaKnown RBP16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 ZNF582Q96NG8 517 aaPredicted RBP16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 PRRG3Q9BZD7 231 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 SYT4Q9H2B2 425 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 Q9H521 79 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 RPRD1BQ9NQG5 326 aaKnown RBP16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 ASB6Q9NWX5 421 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 EMC3Q9P0I2 261 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 OSGIN2Q9Y236 505 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 RCE1Q9Y256 329 aa16.82■□□□□ 0.28
CHMP4A-201ENST00000347519 FAM171A2A8MVW0 826 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 PRR23D1E9PI22 279 aaPredicted RBP16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 UPK3AO75631 287 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 IGHG1P01857 330 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 PRR23D2P0DMB1 279 aaPredicted RBP16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 SLC2A5P22732 501 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 CEACAM8P31997 349 aaPredicted RBP16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 PYCR1P32322 319 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 TLE1Q04724 770 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 ETFDHQ16134 617 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 IGFBP7Q16270 282 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 HIST3H3Q16695 136 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 TMEM201Q5SNT2 666 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 LINGO2Q7L985 606 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 OR6V1Q8N148 313 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 OR51L1Q8NGJ5 315 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 ZNF566Q969W8 418 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 SNX18Q96RF0 628 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 TM9SF2Q99805 663 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 ALG12Q9BV10 488 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 NUAK2Q9H093 628 aa16.81■□□□□ 0.28
CHMP4A-201ENST00000347519 C12orf49Q9H741 205 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms