RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 APOBEC3AP31941 199 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 TTKP33981 857 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 AQP2P41181 271 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 GUCA1AP43080 201 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 SLC9A3P48764 834 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 TUBA1BP68363 451 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 TUBA4AP68366 448 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 NPRL3Q12980 569 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 GSG1Q2KHT4 349 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 ALG10Q5BKT4 473 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 FGD3Q5JSP0 725 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 TUBA1AQ71U36 451 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 NRMQ8IXM6 262 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 ARHGAP24Q8N264 748 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 OR4F15Q8NGB8 312 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 FNDC8Q8TC99 324 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 KCNN2Q9H2S1 579 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 C20orf141Q9NUB4 165 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 SNX13Q9Y5W8 968 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 HEATR1Q9H583 2144 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 RAI1Q7Z5J4 1906 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 IGHV1-18A0A0C4DH31 117 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 NPIPB13A6NJU9 1138 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 FAM171A2A8MVW0 826 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 B2RBV5 119 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 NPIPB4C9JG80 1138 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 E7EQL1 145 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 ATP6V1G2-DDX39BF2Z307 99 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 J3KTA2 159 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 DHHO43323 396 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 MGRN1O60291 552 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 SEC14L2O76054 403 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 UBL3O95164 117 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 SOD3P08294 240 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 OR8G3PP0DMU2 310 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 B4GALT1P15291 398 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 ACADSP16219 412 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 IDH3GP51553 393 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 PRKCDQ05655 676 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 SPOCK1Q08629 439 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 PGGHGQ32M88 737 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 FAM205BPQ63HN1 556 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 MBOAT2Q6ZWT7 520 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 DPPA2Q7Z7J5 298 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 DTX2Q86UW9 622 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 TMEM54Q969K7 222 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 PYURFQ96I23 114 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 C18orf12Q96KH6 178 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 Q96MF0 132 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 TRAF4Q9BUZ4 470 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 NMNAT1Q9HAN9 279 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 CRNNQ9UBG3 495 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 FBXO9Q9UK97 447 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 AURKCQ9UQB9 309 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 HIF3AQ9Y2N7 669 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 SPEF1Q9Y4P9 236 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 HRNRQ86YZ3 2850 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 MED13LQ71F56 2210 aa13.75□□□□□ -0.21
TSPAN4-201ENST00000346501 A6NIZ1 184 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 PIP5K1CO60331 668 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 IGKV3-15P01624 115 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 QDPRP09417 244 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 PGA4P0DJD7 388 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 PGA3P0DJD8 388 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 CALB2P22676 271 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 RPL4P36578 427 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 RAP1BP61224 184 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 RAP1AP62834 184 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 NAAAQ02083 359 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 CD47Q08722 323 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 LAPTM4AQ15012 233 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 RAB35Q15286 201 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 PHYHD1Q5SRE7 291 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 NHLRC1Q6VVB1 395 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 ZNF627Q7L945 461 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 MDP1Q86V88 176 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 FITM2Q8N6M3 262 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 FAM156AQ8NDB6 213 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 NOXO1Q8NFA2 376 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 OR51A7Q8NH64 312 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 IGFBPL1Q8WX77 278 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 POP5Q969H6 163 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 ZNF837Q96EG3 531 aaPredicted RBP13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 RBP7Q96R05 134 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 TXNIPQ9H3M7 391 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 NELFAQ9H3P2 528 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 RNF121Q9H920 327 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 ADAM21Q9UKJ8 722 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 V9GYQ6 96 aa13.74□□□□□ -0.21
TSPAN4-201ENST00000346501 A0A087WUU8 490 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 A0A1W2PRQ8 180 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 hCG_2039718K7EN88 272 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 OVOL3O00110 214 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 FFAR1O14842 300 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 ARPC2O15144 300 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 PTHP01270 115 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 IGLV1-44P01699 117 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 HLA-HP01893 362 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 CECR9P0C854 216 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 CDKN1AP38936 164 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms