RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 PWWP2BQ6NUJ5 590 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 COX15Q7KZN9 410 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 OR11H7Q8NGC8 314 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 OR2G2Q8NGZ5 317 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 LILRB4Q8NHJ6 448 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 THEM6Q8WUY1 208 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 ULBP3Q9BZM4 244 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 SLCO1C1Q9NYB5 712 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 COPS7AQ9UBW8 275 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 PDCD5O14737 125 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 SUSD5O60279 629 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 SYPP08247 313 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 S100A1P23297 94 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 LCN1P31025 176 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 PNLIPRP2P54317 469 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 PLA2G7Q13093 441 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 ETFDHQ16134 617 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 ACKR1Q16570 336 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 SLC29A4Q7RTT9 530 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 LRRTM1Q86UE6 522 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 CARFQ8N187 725 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 DUSP19Q8WTR2 217 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 CCDC74AQ96AQ1 378 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 KLHL15Q96M94 604 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 CMTM3Q96MX0 182 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 INTS14Q96SY0 518 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 OR11A1Q9GZK7 315 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 NUBP2Q9Y5Y2 271 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 FREM3P0C091 2139 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 TMED7-TICAM2A0A0A6YYA0 188 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 BCAT2O15382 392 aaPredicted RBP13.95□□□□□ -0.18
UPF3B-202ENST00000345865 GMDSO60547 372 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 ITGA10O75578 1167 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 DHFRP00374 187 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 GP1BBP13224 206 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 PGCP20142 388 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 PTH2RP49190 550 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 SNRPD2P62316 118 aaKnown RBP13.95□□□□□ -0.18
UPF3B-202ENST00000345865 INSM1Q01101 510 aaPredicted RBP13.95□□□□□ -0.18
UPF3B-202ENST00000345865 SNTB2Q13425 540 aaKnown RBP13.95□□□□□ -0.18
UPF3B-202ENST00000345865 CCDC92Q53HC0 331 aaPredicted RBP13.95□□□□□ -0.18
UPF3B-202ENST00000345865 OR5M10Q6IEU7 315 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 LINGO2Q7L985 606 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 SLC38A9Q8NBW4 561 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 OR52I2Q8NH67 350 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 GPR119Q8TDV5 335 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 DNASE2BQ8WZ79 361 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 SLA2Q9H6Q3 261 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 TMED7Q9Y3B3 224 aa13.95□□□□□ -0.18
UPF3B-202ENST00000345865 C2orf72A6NCS6 295 aa13.94□□□□□ -0.18
UPF3B-202ENST00000345865 H0YC42 278 aa13.94□□□□□ -0.18
UPF3B-202ENST00000345865 KIR3DL2P43630 455 aa13.94□□□□□ -0.18
UPF3B-202ENST00000345865 STARD6P59095 220 aa13.94□□□□□ -0.18
UPF3B-202ENST00000345865 CBFBQ13951 182 aa13.94□□□□□ -0.18
UPF3B-202ENST00000345865 SGCBQ16585 318 aa13.94□□□□□ -0.18
UPF3B-202ENST00000345865 BAIAP2L2Q6UXY1 529 aa13.94□□□□□ -0.18
UPF3B-202ENST00000345865 SLC35D2Q76EJ3 337 aa13.94□□□□□ -0.18
UPF3B-202ENST00000345865 OTOSQ8NHW6 89 aa13.94□□□□□ -0.18
UPF3B-202ENST00000345865 ZNF519Q8TB69 540 aa13.94□□□□□ -0.18
UPF3B-202ENST00000345865 SYNPRQ8TBG9 265 aa13.94□□□□□ -0.18
UPF3B-202ENST00000345865 NSMAFQ92636 917 aa13.94□□□□□ -0.18
UPF3B-202ENST00000345865 GTPBP2Q9BX10 602 aaKnown RBP13.94□□□□□ -0.18
UPF3B-202ENST00000345865 TCF7L1Q9HCS4 588 aa13.94□□□□□ -0.18
UPF3B-202ENST00000345865 KLK11Q9UBX7 282 aa13.94□□□□□ -0.18
UPF3B-202ENST00000345865 B9D1Q9UPM9 204 aa13.94□□□□□ -0.18
UPF3B-202ENST00000345865 MRPS17Q9Y2R5 130 aaKnown RBP13.94□□□□□ -0.18
UPF3B-202ENST00000345865 FABP7O15540 132 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 SLC25A12O75746 678 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 TMIGD3P0DMS9 266 aaPredicted RBP13.93□□□□□ -0.18
UPF3B-202ENST00000345865 CXCL3P19876 107 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 IL11P20809 199 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 P2RX1P51575 399 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 AFF3P51826 1226 aaKnown RBP13.93□□□□□ -0.18
UPF3B-202ENST00000345865 EGR3Q06889 387 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 SHBQ15464 509 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 FAM69AQ5T7M9 428 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 MAMDC2Q7Z304 686 aaPredicted RBP13.93□□□□□ -0.18
UPF3B-202ENST00000345865 PRSS42Q7Z5A4 293 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 BEST4Q8NFU0 473 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 OR8K3Q8NH51 312 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 METTL21AQ8WXB1 218 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 MED28Q9H204 178 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 MRPL22Q9NWU5 206 aaKnown RBP13.93□□□□□ -0.18
UPF3B-202ENST00000345865 FOXJ3Q9UPW0 622 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 MUC3AQ02505 3323 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 CACNA1EQ15878 2313 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 PRSS37A4D1T9 235 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 POLR2HP52434 150 aaKnown RBP13.93□□□□□ -0.18
UPF3B-202ENST00000345865 RPL27P61353 136 aaKnown RBP13.93□□□□□ -0.18
UPF3B-202ENST00000345865 GPLD1P80108 840 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 DYRK1AQ13627 763 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 GSG1Q2KHT4 349 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 LRRN1Q6UXK5 716 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 ZNF574Q6ZN55 896 aaPredicted RBP13.93□□□□□ -0.18
UPF3B-202ENST00000345865 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.93□□□□□ -0.18
UPF3B-202ENST00000345865 DND1Q8IYX4 353 aaKnown RBP13.93□□□□□ -0.18
UPF3B-202ENST00000345865 SIX5Q8N196 739 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 KDM8Q8N371 416 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 PLPP5Q8NEB5 264 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 PPP1R14AQ96A00 147 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms