RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 EXO1Q9UQ84 846 aaKnown RBP16.11■□□□□ 0.17
SPAST-202ENST00000345662 UMAD1C9J7I0 102 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 JTBO76095 146 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 SOD1P00441 154 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 MT-ND4LP03901 98 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 DBHP09172 617 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 ZNF728P0DKX0 622 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 MRPL19P49406 292 aaKnown RBP16.11■□□□□ 0.17
SPAST-202ENST00000345662 ATP1B3P54709 279 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 ERVK-16P61578 105 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 MLC1Q15049 377 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 C1orf198Q9H425 327 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 CMC2Q9NRP2 79 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 CD1EP15812 388 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 POU3F3P20264 500 aaPredicted RBP16.1■□□□□ 0.17
SPAST-202ENST00000345662 SOX18P35713 384 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 PMPCAQ10713 525 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 SLC36A2Q495M3 483 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 MFSD12Q6NUT3 480 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 SLC48A1Q6P1K1 146 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 DPPA2Q7Z7J5 298 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 BAP18Q8IXM2 172 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 ULBP3Q9BZM4 244 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 EMC9Q9Y3B6 208 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 ZC3H12DA2A288 527 aaKnown RBP16.1■□□□□ 0.17
SPAST-202ENST00000345662 PRKRAO75569 313 aaKnown RBP16.1■□□□□ 0.17
SPAST-202ENST00000345662 IGHG1P01857 330 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 HLA-FP30511 346 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 CSNK1A1P48729 337 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 CLDN2P57739 230 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 PDZD11Q5EBL8 140 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 FAM74A1Q5RGS3 127 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 OTUD1Q5VV17 481 aaPredicted RBP16.1■□□□□ 0.17
SPAST-202ENST00000345662 CST9LP1Q5W188 147 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 FAAP20Q6NZ36 180 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 FAM57BQ71RH2 274 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 OR1J2Q8NGS2 313 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 SLC39A9Q9NUM3 307 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 SPHK1Q9NYA1 384 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 GAB2Q9UQC2 676 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 NUP98P52948 1817 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 UBR2Q8IWV8 1755 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 SERINC4A6NH21 518 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 CYTIPO60759 359 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 VIPR2P41587 438 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 ZNF239Q16600 458 aaKnown RBP16.1■□□□□ 0.17
SPAST-202ENST00000345662 CCSMST1Q4G0I0 132 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 ZNF765Q7L2R6 523 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 PFN4Q8NHR9 129 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 FN3KRPQ9HA64 309 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 HS3ST2Q9Y278 367 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 FITM1A5D6W6 292 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 PLPP1O14494 284 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 RPL34P49207 117 aaKnown RBP16.1■□□□□ 0.17
SPAST-202ENST00000345662 AFMIDQ63HM1 303 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 ADGRG3Q86Y34 549 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 TEX19Q8NA77 164 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 NLGN4YQ8NFZ3 816 aaPredicted RBP16.1■□□□□ 0.17
SPAST-202ENST00000345662 SMIM4Q8WVI0 70 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 PCDHGA5Q9Y5G8 931 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 NWD2Q9ULI1 1742 aa16.1■□□□□ 0.17
SPAST-202ENST00000345662 A0A1B0GTL3 188 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 ZNF93P35789 620 aaPredicted RBP16.09■□□□□ 0.17
SPAST-202ENST00000345662 HBG1P69891 147 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 HBG2P69892 147 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 SLC16A11Q8NCK7 471 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 RSC1A1Q92681 617 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 INSM2Q96T92 566 aaPredicted RBP16.09■□□□□ 0.17
SPAST-202ENST00000345662 AUNIPQ9H7T9 357 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 SLC2A10O95528 541 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 MMP15P51511 669 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 TMEM64Q6YI46 380 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 HPSE2Q8WWQ2 592 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 BLACEA4D250 179 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 GJE1A6NN92 205 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 IFITM5A6NNB3 132 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 SLC6A12P48065 614 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 RUNX3Q13761 415 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 MSMO1Q15800 293 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 LIPNQ5VXI9 398 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 MRPL21Q7Z2W9 205 aaKnown RBP16.09■□□□□ 0.17
SPAST-202ENST00000345662 ZNF100Q8IYN0 542 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 OR9K2Q8NGE7 335 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 MR1Q95460 341 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 RASD2Q96D21 266 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 PARP12Q9H0J9 701 aaKnown RBP16.09■□□□□ 0.17
SPAST-202ENST00000345662 TCRBV21S2A2A0A5A6 115 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 SULT2B1O00204 365 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 YY2O15391 372 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 CHRM2P08172 466 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 PCMT1P22061 227 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 NTSR1P30989 418 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 RAB1AP62820 205 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 ADIRFQ15847 76 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 WDR88Q6ZMY6 472 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 CALHM3Q86XJ0 350 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 BORCS7Q96B45 105 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 CAPNS2Q96L46 248 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 GABRQQ9UN88 632 aa16.09■□□□□ 0.17
SPAST-202ENST00000345662 CRYBG1Q9Y4K1 1723 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms