RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 OR6X1Q8NH79 312 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 LGR4Q9BXB1 951 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 SYNPO2LQ9H987 977 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 STEAP1Q9UHE8 339 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 CENPFP49454 3210 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 CASP8AP2Q9UKL3 1982 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 FAM157AC9JC47 383 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 TBL1XO60907 577 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 WNT11O96014 354 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 CASP6P55212 293 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 MEF2AQ02078 507 aaPredicted RBP16.91■□□□□ 0.3
SMPD1-201ENST00000342245 CRMP1Q14194 572 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 CTXN3Q4LDR2 81 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 ADAM5Q6NVV9 412 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 LYG2Q86SG7 212 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 OR4E2Q8NGC2 313 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 GPBAR1Q8TDU6 330 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 ANAPC1Q9H1A4 1944 aa16.91■□□□□ 0.3
SMPD1-201ENST00000342245 MYO10Q9HD67 2058 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 SEC14L6B5MCN3 397 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 CTSHP09668 335 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 PPICP45877 212 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 LASP1Q14847 261 aaKnown RBP16.9■□□□□ 0.3
SMPD1-201ENST00000342245 DHCR24Q15392 516 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 OR7A5Q15622 319 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 AKIRIN2Q53H80 203 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 AWAT1Q58HT5 328 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 ARHGAP11AQ6P4F7 1023 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 GPX8Q8TED1 209 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 LCN9Q8WX39 176 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 ALG14Q96F25 216 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 SELENOIQ9C0D9 397 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 RGCCQ9H4X1 137 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 PISDQ9UG56 409 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 ICAM5Q9UMF0 924 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 ADAM18Q9Y3Q7 739 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 CTAG2O75638 210 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 F10P00742 488 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 TMIGD3P0DMS9 266 aaPredicted RBP16.9■□□□□ 0.3
SMPD1-201ENST00000342245 CFPP27918 469 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 PRKAG1P54619 331 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 AMZ1Q400G9 498 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 Q499Y3 187 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 STPG1Q5TH74 334 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 FAHD2BQ6P2I3 314 aaPredicted RBP16.9■□□□□ 0.3
SMPD1-201ENST00000342245 RFLNAQ6ZTI6 216 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 DPPA2Q7Z7J5 298 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 OR2L13Q8N349 312 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 COMMD1Q8N668 190 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 OR9A1PQ8NGU1 263 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 MITD1Q8WV92 249 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 OVCA2Q8WZ82 227 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 DCUN1D4Q92564 292 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 FAHD2AQ96GK7 314 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 RBM18Q96H35 190 aaKnown RBP16.9■□□□□ 0.3
SMPD1-201ENST00000342245 ASB16Q96NS5 453 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 SOX7Q9BT81 388 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 PARP11Q9NR21 331 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 C5AR2Q9P296 337 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 KCNE5Q9UJ90 142 aa16.9■□□□□ 0.3
SMPD1-201ENST00000342245 A0A0A6YYC8 382 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-201ENST00000342245 hCG_1809904A0A1W2PP81 198 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 A0A1W2PR64 198 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 A0A1W2PRV1 198 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 TMEM202A6NGA9 273 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 OR2AG2A6NM03 316 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 I3L1I5 382 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-201ENST00000342245 ADAM10O14672 748 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 MTX2O75431 263 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 IL2RAP01589 272 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 HMGN2P05204 90 aaKnown RBP16.89■□□□□ 0.29
SMPD1-201ENST00000342245 CD80P33681 288 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 NCBP2P52298 156 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMPD1-201ENST00000342245 KIAA0141Q14154 515 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-201ENST00000342245 TMCO2Q7Z6W1 182 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-201ENST00000342245 RANBP3LQ86VV4 465 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-201ENST00000342245 PNLDC1Q8NA58 520 aaKnown RBP16.89■□□□□ 0.29
SMPD1-201ENST00000342245 MS4A8Q9BY19 250 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 MRPL37Q9BZE1 423 aaKnown RBP16.89■□□□□ 0.29
SMPD1-201ENST00000342245 PIAS3Q9Y6X2 628 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 TSPAN11A1L157 253 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 CPED1A4D0V7 1026 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 OR52A4PA6NMU1 304 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 SLC38A8A6NNN8 435 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 TSPAN6O43657 245 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 CRHP06850 196 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 OR2B8PP59922 312 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 MAP2K5Q13163 448 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 MORN1Q5T089 497 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 NKAIN2Q5VXU1 208 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 ANKRD33Q7Z3H0 272 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 SLC25A42Q86VD7 318 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 TMPRSS12Q86WS5 348 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 OR1J1Q8NGS3 322 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 OR8S1Q8NH09 359 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 NUBPLQ8TB37 319 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 NMES1Q9C002 83 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 SYT4Q9H2B2 425 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 BCO1Q9HAY6 547 aa16.89■□□□□ 0.29
SMPD1-201ENST00000342245 PRG3Q9Y2Y8 225 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms