RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 C17orf82Q86X59 251 aaPredicted RBP13.19□□□□□ -0.3
TDP2-201ENST00000341060 DND1Q8IYX4 353 aaKnown RBP13.19□□□□□ -0.3
TDP2-201ENST00000341060 PIAS4Q8N2W9 510 aaPredicted RBP13.19□□□□□ -0.3
TDP2-201ENST00000341060 C1orf216Q8TAB5 229 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 C15orf40Q8WUR7 153 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 HIST1H2ACQ93077 130 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 TSLPQ969D9 159 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 CITED4Q96RK1 184 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 RTN4RQ9BZR6 473 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 COMMD4Q9H0A8 199 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 SYT4Q9H2B2 425 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 CUTCQ9NTM9 273 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 B3GNT2Q9NY97 397 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 NKIRAS2Q9NYR9 191 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 SCP2D1Q9UJQ7 156 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 IKZF2Q9UKS7 526 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 FKBP7Q9Y680 259 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 TMEM14AQ9Y6G1 99 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 A0A1B0GUH1 482 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 H3BMH7 237 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 TPPPO94811 219 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 DDAH2O95865 285 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 LCN1P31025 176 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 SOX2P48431 317 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 VEGFCP49767 419 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 SCAND1P57086 179 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 RPS15P62841 145 aaKnown RBP13.19□□□□□ -0.3
TDP2-201ENST00000341060 DEFB123Q8N688 67 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 OR2G2Q8NGZ5 317 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 MSANTD3Q96H12 275 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 GUCD1Q96NT3 240 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 GAL3ST4Q96RP7 486 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 INTS14Q96SY0 518 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 PHF7Q9BWX1 381 aaPredicted RBP13.19□□□□□ -0.3
TDP2-201ENST00000341060 BEX1Q9HBH7 125 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 FLVCR2Q9UPI3 526 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 EXPH5Q8NEV8 1989 aa13.19□□□□□ -0.3
TDP2-201ENST00000341060 TRBV5-7A0A0A0MS05 114 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 IGHV1OR15-9A0A0B4J2B8 117 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 A0A1B0GTH9 108 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 ACOT7O00154 380 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 TNFRSF10AO00220 468 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 PHYHO14832 338 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 HCRTR2O43614 444 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 NOS1APO75052 506 aaPredicted RBP13.18□□□□□ -0.3
TDP2-201ENST00000341060 KHDRBS3O75525 346 aaKnown RBP13.18□□□□□ -0.3
TDP2-201ENST00000341060 BGLAPP02818 100 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 DNASE1P24855 282 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 CD38P28907 300 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 OR1D4P47884 311 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 OR3A3P47888 321 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 KCNAB1Q14722 419 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 CLPPQ16740 277 aaPredicted RBP13.18□□□□□ -0.3
TDP2-201ENST00000341060 COL28A1Q2UY09 1125 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 METTL11BQ5VVY1 283 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 TMPRSS12Q86WS5 348 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 PRR22Q8IZ63 422 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 SDR16C5Q8N3Y7 309 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 ZNF417Q8TAU3 575 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 TMEM106AQ96A25 262 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 TPSD1Q9BZJ3 242 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 ZNF436Q9C0F3 470 aaPredicted RBP13.18□□□□□ -0.3
TDP2-201ENST00000341060 RAB33BQ9H082 229 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 HEXA-AS1Q9H8Q6 139 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 SLC2A4RGQ9NR83 387 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 TAS2R10Q9NYW0 307 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 TRAV8-7A0A075B6U6 113 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 ANXA2P2A6NMY6 339 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 CDC40O60508 579 aaKnown RBP eCLIP13.18□□□□□ -0.3
TDP2-201ENST00000341060 ANXA2P07355 339 aaKnown RBP13.18□□□□□ -0.3
TDP2-201ENST00000341060 FREM3P0C091 2139 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 CXCR1P25024 350 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 IL12BP29460 328 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 RPS27P42677 84 aaKnown RBP13.18□□□□□ -0.3
TDP2-201ENST00000341060 TAS2R20P59543 309 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 DCAF7P61962 342 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 RASGEF1BQ0VAM2 473 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 IKZF1Q13422 519 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 ELAVL1Q15717 326 aaKnown RBP13.18□□□□□ -0.3
TDP2-201ENST00000341060 DNM1P46Q6ZS02 220 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 ZNF676Q8N7Q3 588 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 DNAAF1Q8NEP3 725 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 OTOSQ8NHW6 89 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 GPR148Q8TDV2 347 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 MVB12AQ96EY5 273 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 ZDHHC12Q96GR4 267 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 TAS2R5Q9NYW4 299 aa13.18□□□□□ -0.3
TDP2-201ENST00000341060 A0A1W2PQD3 144 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 A0A1W2PR77 199 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 ZNF217O75362 1048 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 MAS1P04201 325 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 CFPP27918 469 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 P2RX3P56373 397 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 DMWDQ09019 674 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 EBPQ15125 230 aaKnown RBP13.17□□□□□ -0.3
TDP2-201ENST00000341060 TOMM34Q15785 309 aaPredicted RBP13.17□□□□□ -0.3
TDP2-201ENST00000341060 C9orf40Q8IXQ3 194 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 PM20D2Q8IYS1 436 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 PRSS35Q8N3Z0 413 aa13.17□□□□□ -0.3
TDP2-201ENST00000341060 FAM109AQ8N4B1 249 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms