RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 DPY19L4Q7Z388 723 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 MRPL41Q8IXM3 137 aaKnown RBP11.66□□□□□ -0.54
LIN54-201ENST00000340417 SAMD12Q8N8I0 201 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 AMER3Q8N944 861 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 LIPHQ8WWY8 451 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 IL1F10Q8WWZ1 152 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 HPS1Q92902 700 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 C4orf36Q96KX1 117 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 Q96M85 177 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 KCNIP3Q9Y2W7 256 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 FAM96BQ9Y3D0 163 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 MYO16Q9Y6X6 1858 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 M0R129 80 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 FBP2O00757 339 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 CSF2RBP32927 897 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 MAP2K4P45985 399 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 C9orf152Q5JTZ5 239 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 DCXRQ7Z4W1 244 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 NUDT8Q8WV74 236 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 SLC5A6Q9Y289 635 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 ENSAO43768 121 aaKnown RBP11.65□□□□□ -0.54
LIN54-201ENST00000340417 GASTP01350 101 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 C7P10643 843 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 SLC2A2P11168 524 aaPredicted RBP11.65□□□□□ -0.54
LIN54-201ENST00000340417 MS4A2Q01362 244 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 KEAP1Q14145 624 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 ZMYND11Q15326 602 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 ZIC1Q15915 447 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 C3AR1Q16581 482 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 OR2M7Q8NG81 312 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 MZB1Q8WU39 189 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 DGCR14Q96DF8 476 aaKnown RBP11.65□□□□□ -0.54
LIN54-201ENST00000340417 MNTQ99583 582 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 METTL9Q9H1A3 318 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 THSD7BQ9C0I4 1608 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 PRICKLE3O43900 615 aaPredicted RBP11.65□□□□□ -0.54
LIN54-201ENST00000340417 ATG12O94817 140 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 CYC1P08574 325 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 ERVK-16P61578 105 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 RIPPLY1Q0D2K3 151 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 PMPCAQ10713 525 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 IKZF1Q13422 519 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 ATP1A1-AS1Q5TC04 95 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 DEFB108BQ8NET1 73 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 FCAMRQ8WWV6 532 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 MED29Q9NX70 200 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 TUBA8Q9NY65 449 aaPredicted RBP11.65□□□□□ -0.54
LIN54-201ENST00000340417 ERRFI1Q9UJM3 462 aaPredicted RBP11.65□□□□□ -0.54
LIN54-201ENST00000340417 CMAHPQ9Y471 501 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 A0A1B0GTH9 108 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 B4GALT1P15291 398 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 FOXK2Q01167 660 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 ACKR1Q16570 336 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 CDNFQ49AH0 187 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 GDPD3Q7L5L3 318 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 ALKBH3Q96Q83 286 aaPredicted RBP11.65□□□□□ -0.54
LIN54-201ENST00000340417 MGLLQ99685 303 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 UBL3O95164 117 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 CHMP24386 653 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 RELAQ04206 551 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 C22orf42Q6IC83 251 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 KCTD20Q7Z5Y7 419 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 RETREG3Q86VR2 466 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 SLCO5A1Q9H2Y9 848 aa11.65□□□□□ -0.54
LIN54-201ENST00000340417 MN1Q10571 1320 aaPredicted RBP11.65□□□□□ -0.55
LIN54-201ENST00000340417 CRYBA1P05813 215 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 HES1Q14469 280 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 ZNF773Q6PK81 442 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 ZNF808Q8N4W9 903 aaPredicted RBP11.64□□□□□ -0.55
LIN54-201ENST00000340417 TMEM99Q8N816 258 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 TUBA1CQ9BQE3 449 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 GLRX2Q9NS18 164 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 NTNG1Q9Y2I2 539 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 IGLV3-19P01714 112 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 ALDOBP05062 364 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 FXYD6P3P58550 94 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 CEACAM16Q2WEN9 425 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 TMEM185AQ8NFB2 350 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 RHBDD3Q9Y3P4 386 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 CLDN24A6NM45 220 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 PLOD2O00469 737 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 SCGNO76038 276 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 GTF2F2P13984 249 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 SPOCK1Q08629 439 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 NKAIN4Q8IVV8 208 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 GPR119Q8TDV5 335 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 AMBRA1Q9C0C7 1298 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 TBCCD1Q9NVR7 557 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 ABCD2Q9UBJ2 740 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 NUP50Q9UKX7 468 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 HIF3AQ9Y2N7 669 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 TFPTP0C1Z6 253 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 FPR3P25089 353 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 ZFP36L2P47974 494 aaKnown RBP11.64□□□□□ -0.55
LIN54-201ENST00000340417 GIPRP48546 466 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 MLF1P58340 268 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 LOC101059948A0A1B0GTJ6 334 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 SOD1P00441 154 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 FAM87AP0C7U9 286 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 RAB3BP20337 219 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms