RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 ALG12Q9BV10 488 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 TUBB1Q9H4B7 451 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 TMED7Q9Y3B3 224 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 HSPE1-MOB4S4R3N1 261 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 SPEF2Q9C093 1822 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 C21orf33P30042 268 aaPredicted RBP10.89□□□□□ -0.67
SHANK2-201ENST00000338508 PRR27Q6MZM9 219 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 TMEM135Q86UB9 458 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 OR56B1Q8NGI3 324 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 PRR14Q9BWN1 585 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 HTR2CP28335 458 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 SELPLGQ14242 412 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 ZNF582Q96NG8 517 aaPredicted RBP10.89□□□□□ -0.67
SHANK2-201ENST00000338508 POFUT1Q9H488 388 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 GPR173Q9NS66 373 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 CHRNA9Q9UGM1 479 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 PADI1Q9ULC6 663 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 PRAMEF25A6NGN4 478 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 ADAM12O43184 909 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 AKR7A3O95154 331 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 SMIM17P0DL12 118 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 C17orf67Q0P5P2 114 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 GPR19Q15760 415 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 PRAMEF5Q5TYX0 476 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 PRAMEF6Q5VXH4 476 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 DPPA2Q7Z7J5 298 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 HSD17B11Q8NBQ5 300 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 OR10K1Q8NGX5 313 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 SFT2D1Q8WV19 159 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 SLC22A7Q9Y694 548 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 SOX15O60248 233 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 GUSBP08236 651 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 CYBAP13498 195 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 AMIGO3Q86WK7 504 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 PTTG1O95997 202 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 B3GALT4O96024 378 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 GASTP01350 101 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 MMP12P39900 470 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 RPS16P62249 146 aaKnown RBP10.88□□□□□ -0.67
SHANK2-201ENST00000338508 SEMA3BQ13214 749 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 CLEC12BQ2HXU8 276 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 GLYR1Q49A26 553 aaPredicted RBP10.88□□□□□ -0.67
SHANK2-201ENST00000338508 CLVS2Q5SYC1 327 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 OR52H1Q8NGJ2 320 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 KHSRPQ92945 711 aaKnown RBP eCLIP10.88□□□□□ -0.676e-7■■■□□ 16.4
SHANK2-201ENST00000338508 MBOAT4Q96T53 435 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 SPHK1Q9NYA1 384 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 GOSR1O95249 250 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 FOXC1Q12948 553 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 LPCAT3Q6P1A2 487 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 LGALS14Q8TCE9 139 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 ZNF480Q8WV37 535 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 ZCCHC4Q9H5U6 513 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 CRLF2Q9HC73 371 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 CPNE5Q9HCH3 593 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 ZNF331Q9NQX6 463 aaPredicted RBP10.88□□□□□ -0.67
SHANK2-201ENST00000338508 C1GALT1Q9NS00 363 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 P4HTMQ9NXG6 502 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 NPTNQ9Y639 398 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 SIRPB1O00241 398 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 PTGESO14684 152 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 CACNG3O60359 315 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 CT45A10P0DMU9 189 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 LAP3P28838 519 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 MS4A2Q01362 244 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 CRMP1Q14194 572 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 RASD2Q96D21 266 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 ARPC5LQ9BPX5 153 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 SHROOM3Q8TF72 1996 aa10.88□□□□□ -0.67
SHANK2-201ENST00000338508 ARPC3O15145 178 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 ITGAMP11215 1152 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 RPL7P18124 248 aaKnown RBP10.87□□□□□ -0.67
SHANK2-201ENST00000338508 TATDN3Q17R31 274 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 WDR5BQ86VZ2 330 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 ZBED3Q96IU2 234 aaPredicted RBP10.87□□□□□ -0.67
SHANK2-201ENST00000338508 EGLN2Q96KS0 407 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 SLC30A3Q99726 388 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 AGPAT4Q9NRZ5 378 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 ONECUT1Q9UBC0 465 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 DNAJB5O75953 348 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 SLC10A3P09131 477 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 ZNF93P35789 620 aaPredicted RBP10.87□□□□□ -0.67
SHANK2-201ENST00000338508 RAB40BQ12829 278 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 DCXRQ7Z4W1 244 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 ZNF486Q96H40 463 aaPredicted RBP10.87□□□□□ -0.67
SHANK2-201ENST00000338508 HSD3B7Q9H2F3 369 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 ISYNA1Q9NPH2 558 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 CDHR4A6H8M9 788 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 GPR37O15354 613 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 RGS11O94810 467 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 HLA-HP01893 362 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 DTYMKP23919 212 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 MEP1BQ16820 701 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 PRTGQ2VWP7 1150 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 BCDIN3DQ7Z5W3 292 aaKnown RBP10.87□□□□□ -0.67
SHANK2-201ENST00000338508 RBM12BQ8IXT5 1001 aaKnown RBP10.87□□□□□ -0.67
SHANK2-201ENST00000338508 EDEM2Q9BV94 578 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 OR52A5Q9H2C5 316 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 DCAF13Q9NV06 445 aaKnown RBP10.87□□□□□ -0.67
SHANK2-201ENST00000338508 TAS2R5Q9NYW4 299 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms