RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 SIRPAP78324 504 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 WDR5BQ86VZ2 330 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 SLITRK4Q8IW52 837 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 ZNF440Q8IYI8 595 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 ARL6IP6Q8N6S5 226 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 DMRTB1Q96MA1 342 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 DDOQ99489 341 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 SEMA4CQ9C0C4 833 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 C11orf54Q9H0W9 315 aaPredicted RBP11.35□□□□□ -0.59
LIMK1-201ENST00000336180 KCNK15Q9H427 330 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 ENAMQ9NRM1 1142 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 PHF3Q92576 2039 aaKnown RBP11.35□□□□□ -0.59
LIMK1-201ENST00000336180 IGKV1D-43A0A0B4J1Z2 117 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 EFNA2O43921 213 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 ZFPL1O95159 310 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 ADRB1P08588 477 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 OTX2P32243 289 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 SRP9P49458 86 aaKnown RBP11.35□□□□□ -0.59
LIMK1-201ENST00000336180 SLC26A5P58743 744 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 LIPNQ5VXI9 398 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 PRSS45Q7RTY3 260 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 KMT5CQ86Y97 462 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 Q8N402 240 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 OR4M1Q8NGD0 313 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 SP140LQ9H930 580 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 SEMA5BQ9P283 1151 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 MYEF2Q9P2K5 600 aaKnown RBP11.35□□□□□ -0.59
LIMK1-201ENST00000336180 LAMP5Q9UJQ1 280 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 SLC22A13Q9Y226 551 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 ZFHX4Q86UP3 3567 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 IQCMA0A1B0GVH7 501 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 XKRYO14609 159 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 ADAM10O14672 748 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 RAMP1O60894 148 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 FGF9P31371 208 aaPredicted RBP11.35□□□□□ -0.59
LIMK1-201ENST00000336180 UQCRC1P31930 480 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 POU3F1Q03052 451 aaPredicted RBP11.35□□□□□ -0.59
LIMK1-201ENST00000336180 LGALS3BPQ08380 585 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 SF3A2Q15428 464 aaKnown RBP11.35□□□□□ -0.59
LIMK1-201ENST00000336180 METTL11BQ5VVY1 283 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 ZNF57Q68EA5 555 aaPredicted RBP11.35□□□□□ -0.59
LIMK1-201ENST00000336180 HDHD2Q9H0R4 259 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 PPP4R1LQ9P1A2 415 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 KLHL21Q9UJP4 597 aa11.35□□□□□ -0.59
LIMK1-201ENST00000336180 RIF1Q5UIP0 2472 aaKnown RBP11.34□□□□□ -0.59
LIMK1-201ENST00000336180 GLCEO94923 617 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 AHSA1O95433 338 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 IFNGR1P15260 489 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 MYL9P24844 172 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 CCKBRP32239 447 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 GALNSP34059 522 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 CDK5R1Q15078 307 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 ZNF385CQ66K41 422 aaPredicted RBP11.34□□□□□ -0.59
LIMK1-201ENST00000336180 B3GNTL1Q67FW5 361 aaPredicted RBP11.34□□□□□ -0.59
LIMK1-201ENST00000336180 DMKNQ6E0U4 476 aaPredicted RBP11.34□□□□□ -0.59
LIMK1-201ENST00000336180 GNRHR2Q96P88 292 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 KCNN2Q9H2S1 579 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 ZNF160Q9HCG1 818 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 SLCO1C1Q9NYB5 712 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 MRM2Q9UI43 246 aaKnown RBP11.34□□□□□ -0.59
LIMK1-201ENST00000336180 BAIAP2Q9UQB8 552 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 TRAV36DV7A0A075B6V5 113 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 IGHV3-15A0A0B4J1V0 119 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 A0A1W2PPC1 479 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 H0YC42 278 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 ITGA10O75578 1167 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 OR2T7P0C7T2 308 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 ATF1P18846 271 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 SIGLEC14Q08ET2 396 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 OR7E24Q6IFN5 339 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 SFXN4Q6P4A7 337 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 OR2T27Q8NH04 317 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 TRMT10AQ8TBZ6 339 aaKnown RBP11.34□□□□□ -0.59
LIMK1-201ENST00000336180 UBASH3BQ8TF42 649 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 RGP1Q92546 391 aaPredicted RBP11.34□□□□□ -0.59
LIMK1-201ENST00000336180 SLC39A1Q9NY26 324 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 MYOTQ9UBF9 498 aa11.34□□□□□ -0.59
LIMK1-201ENST00000336180 GPN3Q9UHW5 284 aaPredicted RBP11.34□□□□□ -0.59
LIMK1-201ENST00000336180 COA3Q9Y2R0 106 aaPredicted RBP11.34□□□□□ -0.59
LIMK1-201ENST00000336180 ATP6V1G2-DDX39BF2Z307 99 aa11.33□□□□□ -0.59
LIMK1-201ENST00000336180 MAS1P04201 325 aa11.33□□□□□ -0.59
LIMK1-201ENST00000336180 POLR2HP52434 150 aaKnown RBP11.33□□□□□ -0.59
LIMK1-201ENST00000336180 GPR85P60893 370 aa11.33□□□□□ -0.59
LIMK1-201ENST00000336180 DCAF7P61962 342 aa11.33□□□□□ -0.59
LIMK1-201ENST00000336180 INSM1Q01101 510 aaPredicted RBP11.33□□□□□ -0.59
LIMK1-201ENST00000336180 RSPO4Q2I0M5 234 aaPredicted RBP11.33□□□□□ -0.59
LIMK1-201ENST00000336180 ZNF468Q5VIY5 522 aaPredicted RBP11.33□□□□□ -0.59
LIMK1-201ENST00000336180 SHEQ5VZ18 495 aa11.33□□□□□ -0.59
LIMK1-201ENST00000336180 RASL10BQ96S79 203 aa11.33□□□□□ -0.59
LIMK1-201ENST00000336180 TTYH2Q9BSA4 534 aa11.33□□□□□ -0.59
LIMK1-201ENST00000336180 TMEM43Q9BTV4 400 aa11.33□□□□□ -0.59
LIMK1-201ENST00000336180 PISDQ9UG56 409 aa11.33□□□□□ -0.59
LIMK1-201ENST00000336180 A3GALT2U3KPV4 340 aa11.33□□□□□ -0.59
LIMK1-201ENST00000336180 ZNF593O00488 134 aaPredicted RBP11.33□□□□□ -0.6
LIMK1-201ENST00000336180 ARPC3O15145 178 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 PIN1P1O15428 100 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 PLPP2O43688 288 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 UMODP07911 640 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 ADH7P40394 386 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 NR4A2P43354 598 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms