RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 OR4C6Q8NH72 309 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 PHOSPHO1Q8TCT1 267 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 BRIX1Q8TDN6 353 aaKnown RBP12.66□□□□□ -0.38
SF1-202ENST00000334944 NR4A3Q92570 626 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 TGM7Q96PF1 710 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 WDR77Q9BQA1 342 aaPredicted RBP12.66□□□□□ -0.38
SF1-202ENST00000334944 KRCC1Q9NPI7 259 aaPredicted RBP12.66□□□□□ -0.38
SF1-202ENST00000334944 EXOGQ9Y2C4 368 aaKnown RBP12.66□□□□□ -0.38
SF1-202ENST00000334944 ENTPD2Q9Y5L3 495 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 A0A087WV62 115 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 IRGMA1A4Y4 181 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 EIF1BO60739 113 aaKnown RBP12.66□□□□□ -0.38
SF1-202ENST00000334944 ZNF35P13682 527 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 PYCR1P32322 319 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 EIF1P41567 113 aaKnown RBP12.66□□□□□ -0.38
SF1-202ENST00000334944 CCR4P51679 360 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 RAB38P57729 211 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 TP53I3Q53FA7 332 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 KIAA0895LQ68EN5 471 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 PRSS58Q8IYP2 241 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 OR1M1Q8NGA1 313 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 OR14A16Q8NHC5 309 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 STK35Q8TDR2 534 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 KLHDC7BQ96G42 594 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 C7orf50Q9BRJ6 194 aaKnown RBP12.66□□□□□ -0.38
SF1-202ENST00000334944 SOHLH2Q9NX45 425 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 KLK11Q9UBX7 282 aa12.66□□□□□ -0.38
SF1-202ENST00000334944 FAM86C2PA6NEL3 165 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 RNF13O43567 381 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 FOXS1O43638 330 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 TGM6O95932 706 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 MYF5P13349 255 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 PPP3CBP16298 524 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 ACAA2P42765 397 aaKnown RBP12.65□□□□□ -0.38
SF1-202ENST00000334944 FOXL2P58012 376 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 DCAF12L2Q5VW00 463 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 OR7E24Q6IFN5 339 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 APOOLQ6UXV4 268 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 CEACAM19Q7Z692 300 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 SLITRK4Q8IW52 837 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 LNX2Q8N448 690 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 ZNF321PQ8N8H1 164 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 FAM98AQ8NCA5 519 aaKnown RBP12.65□□□□□ -0.38
SF1-202ENST00000334944 OR5J2Q8NH18 312 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 ZNRF4Q8WWF5 429 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 ZNF285Q96NJ3 590 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 UBL7Q96S82 380 aaPredicted RBP12.65□□□□□ -0.38
SF1-202ENST00000334944 STACQ99469 402 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 KLHDC3Q9BQ90 382 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 DNAJB12Q9NXW2 375 aaKnown RBP12.65□□□□□ -0.38
SF1-202ENST00000334944 A0A0B4J2E0 115 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 KIR2DS5A0A0G2JLQ3 304 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 A0A0G2JNG1 304 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 A0A1B0GX12 115 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 RIIAD1A6NNX1 92 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 KIR2DS3K7RE56 304 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 SLC35E2P0CK97 266 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 NFYBP25208 207 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 KIR2DS5Q14953 304 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 DEFB133Q30KQ1 61 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 LMX1AQ8TE12 382 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 SEMA6CQ9H3T2 930 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 TMEM231Q9H6L2 316 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 PRMT8Q9NR22 394 aaPredicted RBP12.65□□□□□ -0.38
SF1-202ENST00000334944 ZMIZ1Q9ULJ6 1067 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 HS3ST3A1Q9Y663 406 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 PQLC2LA1A4F0 135 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 NKX2-2O95096 273 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 MAP3K8P41279 467 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 CAPZA1P52907 286 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 H2BFSP57053 126 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 OTPQ5XKR4 325 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 OR6S1Q8NH40 331 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 OR5W2Q8NH69 310 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 C16orf52Q8NHV5 167 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 ZPLD1Q8TCW7 415 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 NPDC1Q9NQX5 325 aaPredicted RBP12.65□□□□□ -0.38
SF1-202ENST00000334944 CMC2Q9NRP2 79 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 PCDHGA5Q9Y5G8 931 aa12.65□□□□□ -0.38
SF1-202ENST00000334944 MCIDASD6RGH6 385 aa12.64□□□□□ -0.39
SF1-202ENST00000334944 RGS9O75916 674 aaPredicted RBP12.64□□□□□ -0.39
SF1-202ENST00000334944 RCBTB2O95199 551 aa12.64□□□□□ -0.39
SF1-202ENST00000334944 S100A9P06702 114 aaKnown RBP12.64□□□□□ -0.39
SF1-202ENST00000334944 HIST1H1CP16403 213 aaKnown RBP12.64□□□□□ -0.39
SF1-202ENST00000334944 PSMB1P20618 241 aaKnown RBP12.64□□□□□ -0.39
SF1-202ENST00000334944 RPL4P36578 427 aaKnown RBP12.64□□□□□ -0.39
SF1-202ENST00000334944 RFC3P40938 356 aa12.64□□□□□ -0.39
SF1-202ENST00000334944 SORDQ00796 357 aa12.64□□□□□ -0.39
SF1-202ENST00000334944 KLF9Q13886 244 aaPredicted RBP12.64□□□□□ -0.39
SF1-202ENST00000334944 ZNHIT3Q15649 155 aaPredicted RBP12.64□□□□□ -0.39
SF1-202ENST00000334944 POMZP3Q6PJE2 187 aa12.64□□□□□ -0.39
SF1-202ENST00000334944 PRR22Q8IZ63 422 aa12.64□□□□□ -0.39
SF1-202ENST00000334944 RXFP4Q8TDU9 374 aa12.64□□□□□ -0.39
SF1-202ENST00000334944 TCEAL3Q969E4 200 aa12.64□□□□□ -0.39
SF1-202ENST00000334944 NOX3Q9HBY0 568 aa12.64□□□□□ -0.39
SF1-202ENST00000334944 HRASLSQ9HDD0 168 aa12.64□□□□□ -0.39
SF1-202ENST00000334944 MED17Q9NVC6 651 aa12.64□□□□□ -0.39
SF1-202ENST00000334944 MYEF2Q9P2K5 600 aaKnown RBP12.64□□□□□ -0.39
SF1-202ENST00000334944 IER3IP1Q9Y5U9 82 aa12.64□□□□□ -0.39
SF1-202ENST00000334944 LRP4O75096 1905 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms