RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 PEAR1Q5VY43 1037 aaPredicted RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 ZNF517Q6ZMY9 492 aaPredicted RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 SLC35D2Q76EJ3 337 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 KCTD20Q7Z5Y7 419 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 AKAP14Q86UN6 197 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 ZNF248Q8NDW4 579 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 OR8K3Q8NH51 312 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 STK35Q8TDR2 534 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 ST8SIA1Q92185 356 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 TTC9Q92623 222 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 MR1Q95460 341 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 RNF166Q96A37 237 aaPredicted RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 TXNDC15Q96J42 360 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 KLHL15Q96M94 604 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 INTS14Q96SY0 518 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 ULBP3Q9BZM4 244 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 TXNIPQ9H3M7 391 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 METTL7AQ9H8H3 244 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 CYSLTR2Q9NS75 346 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 PPP4R1LQ9P1A2 415 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 GPR179Q6PRD1 2367 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 CACNA1CQ13936 2221 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 CUL9Q8IWT3 2517 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 TECTAO75443 2155 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 PCNX3Q9H6A9 2034 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 NOTOA8MTQ0 251 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 H3BSH0 61 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 NTN3O00634 580 aaPredicted RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 SEC14L5O43304 696 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 GPRIN2O60269 458 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 TRIM3O75382 744 aaPredicted RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 UPK3AO75631 287 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 TFPIP10646 304 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 EPXP11678 715 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 SNRPBP14678 240 aaKnown RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 NAGAP17050 411 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 ATF1P18846 271 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 INPP1P49441 399 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 DUSP3P51452 185 aaPredicted RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 INSM1Q01101 510 aaPredicted RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 SELENBP1Q13228 472 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 ODF4Q2M2E3 257 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 CEP78Q5JTW2 689 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 TCEAL6Q6IPX3 200 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 BPHLQ86WA6 291 aaPredicted RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 RAB43Q86YS6 212 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 ZNF433Q8N7K0 673 aaPredicted RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 BMPERQ8N8U9 685 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 OR4M1Q8NGD0 313 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 OR5H6Q8NGV6 325 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 NSMAFQ92636 917 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 TCEAL3Q969E4 200 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 AMELYQ99218 206 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 BRD7Q9NPI1 651 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 FRRS1LQ9P0K9 344 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 GPN3Q9UHW5 284 aaPredicted RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 KCNG2Q9UJ96 466 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 B9D1Q9UPM9 204 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 FREM2Q5SZK8 3169 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 ZNF879B4DU55 563 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 FTCDNL1E5RQL4 147 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 ZNF593O00488 134 aaPredicted RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 PIN1P1O15428 100 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 GALR2O43603 387 aaPredicted RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 FZD7O75084 574 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 OPN1LWP04000 364 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 CD1AP06126 327 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 CTLA4P16410 223 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 HOXD12P35452 270 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 APOBEC1P41238 236 aaKnown RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 PUDPQ08623 228 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 FOXF1Q12946 379 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 YIF1BQ5BJH7 314 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 AGAP6Q5VW22 663 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 SLC23A3Q6PIS1 610 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 LRRC69Q6ZNQ3 347 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 OR5AK2Q8NH90 309 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 ZNF519Q8TB69 540 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 RGP1Q92546 391 aaPredicted RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 ITPKCQ96DU7 683 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 AGAP4Q96P64 663 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 RASL10BQ96S79 203 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 UBL7Q96S82 380 aaPredicted RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 HDHD2Q9H0R4 259 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 SLC25A18Q9H1K4 315 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 MRPL39Q9NYK5 338 aaKnown RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 TEKT2Q9UIF3 430 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 MRPS7Q9Y2R9 242 aaKnown RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 PTRH2Q9Y3E5 179 aaKnown RBP6.82□□□□□ -1.32
IFT88-201ENST00000319980 FKBP7Q9Y680 259 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 TMEM14AQ9Y6G1 99 aa6.82□□□□□ -1.32
IFT88-201ENST00000319980 ADAMTS20P59510 1910 aa6.81□□□□□ -1.32
IFT88-201ENST00000319980 ANKRD61A6NGH8 418 aa6.81□□□□□ -1.32
IFT88-201ENST00000319980 ABHD16AO95870 558 aa6.81□□□□□ -1.32
IFT88-201ENST00000319980 CELA2AP08217 269 aa6.81□□□□□ -1.32
IFT88-201ENST00000319980 SYPP08247 313 aa6.81□□□□□ -1.32
IFT88-201ENST00000319980 PSKH1P11801 424 aa6.81□□□□□ -1.32
IFT88-201ENST00000319980 NPR2P20594 1047 aa6.81□□□□□ -1.32
IFT88-201ENST00000319980 PTBP1P26599 531 aaKnown RBP eCLIP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms