RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 SEC14L2O76054 403 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 ZNF432O94892 652 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 CCNB2O95067 398 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 ITGA5P08648 1049 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 IL32P24001 234 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 RPL4P36578 427 aaKnown RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 RAD52P43351 418 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 KIR2DL3P43628 341 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 LIMS1P48059 325 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 SLC9A3P48764 834 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 ERVK-25P63136 954 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 MYBPC1Q00872 1141 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 RUNX1T1Q06455 604 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 GABPB1Q06547 395 aaPredicted RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 ZP4Q12836 540 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 STK11Q15831 433 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 ACKR1Q16570 336 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 TM4SF20Q53R12 229 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 ALG10Q5BKT4 473 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 PGBD2Q6P3X8 592 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 Q6ZT83 130 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 TMPRSS11FQ6ZWK6 438 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 BHLHA15Q7RTS1 189 aaPredicted RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 PXKQ7Z7A4 578 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 KIF18BQ86Y91 864 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 HS3ST5Q8IZT8 346 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 TMEM123Q8N131 208 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 LIPHQ8WWY8 451 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 KISS1RQ969F8 398 aaPredicted RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 S100PBPQ96BU1 408 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 ZNF837Q96EG3 531 aaPredicted RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 OCSTAMPQ9BR26 566 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 MED18Q9BUE0 208 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 ACTR6Q9GZN1 396 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 CCM2LQ9NUG4 571 aaPredicted RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 FOXD3Q9UJU5 478 aaPredicted RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 TMEM5Q9Y2B1 443 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 FREM1Q5H8C1 2179 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 LOC102725191A0A1B0GVB3 256 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 A0A1W2PRG6 482 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 CIB4A0PJX0 185 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 SH3D21A4FU49 640 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 H7C1C5 153 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 AKAP8O43823 692 aaKnown RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 E2F6O75461 281 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 KRT36O76013 467 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 BCL10O95999 233 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 IGF2P01344 180 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 GASTP01350 101 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 THBDP07204 575 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 IGFBP1P08833 259 aaPredicted RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 PRF1P14222 555 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 PRKACGP22612 351 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 SH3BGRP55822 239 aaPredicted RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 FXYD6P3P58550 94 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 CTXN1P60606 82 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 LCN6P62502 163 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 RPS4XP62701 263 aaKnown RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 ROR2Q01974 943 aaKnown RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 ITGADQ13349 1161 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 ZBED5Q49AG3 693 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 SFRP5Q5T4F7 317 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 AMIGO2Q86SJ2 522 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 WFDC8Q8IUA0 241 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 GPR137CQ8N3F9 429 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 ZNF433Q8N7K0 673 aaPredicted RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 CLDN22Q8N7P3 220 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 LRRC75AQ8NAA5 344 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 SYT14Q8NB59 555 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 AQP11Q8NBQ7 271 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 OR6N1Q8NGY5 312 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 FANK1Q8TC84 345 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 GNPDA2Q8TDQ7 276 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 C17orf50Q8WW18 174 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 PYDC1Q8WXC3 89 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 ASB10Q8WXI3 467 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 HTRA1Q92743 480 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 GTPBP3Q969Y2 492 aaKnown RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 TSPAN32Q96QS1 320 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 KATNB1Q9BVA0 655 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 POLDIP3Q9BY77 421 aaKnown RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 DENND2DQ9H6A0 471 aaPredicted RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 KRCC1Q9NPI7 259 aaPredicted RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 ASB6Q9NWX5 421 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 MALT1Q9UDY8 824 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 ZNF346Q9UL40 294 aaKnown RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 RCE1Q9Y256 329 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 HIF3AQ9Y2N7 669 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 ADAM18Q9Y3Q7 739 aa6.92□□□□□ -1.3
CDC42-201ENST00000315554 FLNBO75369 2602 aaKnown RBP6.92□□□□□ -1.3
CDC42-201ENST00000315554 A0A096LPE4 126 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 KRTAP4-8A0A0G2JLE6 195 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 A0A1W2PPZ6 126 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 ZNF587BE7ETH6 402 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 PDLIM1O00151 329 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 PTP4A3O75365 173 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 PPP1R3DO95685 299 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 TSPAN19P0C672 248 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 PSMB1P20618 241 aaKnown RBP6.91□□□□□ -1.3
CDC42-201ENST00000315554 COX5AP20674 150 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms