RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 SDK2Q58EX2 2172 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 A0A0G2JK05 382 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 TP53I11O14683 189 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 UPK3AO75631 287 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 HNRNPCP07910 306 aaKnown RBP eCLIP16.51■□□□□ 0.23
CCDC43-201ENST00000315286 TACSTD2P09758 323 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 IL7P13232 177 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 CD59P13987 128 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 CTLA4P16410 223 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 CENPAP49450 140 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 EVX1P49640 407 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 LIPNQ5VXI9 398 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 PAMR1Q6UXH9 720 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 NDUFAF7Q7L592 441 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 YIPF7Q8N8F6 280 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 SCAIQ8N9R8 606 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 THEM6Q8WUY1 208 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 ACOT12Q8WYK0 555 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 SOSTQ9BQB4 213 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 POTEKPQ9BYX7 375 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 PADI1Q9ULC6 663 aa16.51■□□□□ 0.23
CCDC43-201ENST00000315286 A0A087WV48 116 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 NSG1A0A0A6YYJ2 146 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 IGLV1-36A0A0B4J1U3 117 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 LIPT2A6NK58 231 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 CDX4O14627 284 aaPredicted RBP16.5■□□□□ 0.23
CCDC43-201ENST00000315286 GPRIN2O60269 458 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 ABHD16AO95870 558 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 HLA-DQA2P01906 255 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 OPN1LWP04000 364 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 THBS2P35442 1172 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 MAP2K6P52564 334 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 RPS18P62269 152 aaKnown RBP16.5■□□□□ 0.23
CCDC43-201ENST00000315286 TLE3Q04726 772 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 AGAP7PQ5VUJ5 663 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 SFXN4Q6P4A7 337 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 OPN5Q6U736 354 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 RAB11FIP2Q7L804 512 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 SYT9Q86SS6 491 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 CADM3Q8N126 398 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 SMAD5Q99717 465 aaKnown RBP16.5■□□□□ 0.23
CCDC43-201ENST00000315286 CDCP1Q9H5V8 836 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 CHST11Q9NPF2 352 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 MALT1Q9UDY8 824 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 TRAV1-2A0A0B4J238 106 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 GATBO75879 557 aaKnown RBP16.5■□□□□ 0.23
CCDC43-201ENST00000315286 ZFPL1O95159 310 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 KRT8P05787 483 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 IFNGR1P15260 489 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 APEX1P27695 318 aaKnown RBP16.5■□□□□ 0.23
CCDC43-201ENST00000315286 C19orf57Q0VDD7 668 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 SLC25A35Q3KQZ1 300 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 PYDC2Q56P42 97 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 UNQ9370/PRO34162Q6UXP9 181 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 TIPARPQ7Z3E1 657 aaKnown RBP16.5■□□□□ 0.23
CCDC43-201ENST00000315286 FAM220AQ7Z4H9 259 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 WDFY1Q8IWB7 410 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 GDPD1Q8N9F7 314 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 FADS6Q8N9I5 356 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 AMELYQ99218 206 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 MNTQ99583 582 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 NEURL2Q9BR09 285 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 PPP1R3EQ9H7J1 279 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 KCNG2Q9UJ96 466 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 IKZF2Q9UKS7 526 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 RASD1Q9Y272 281 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 ZNF281Q9Y2X9 895 aa16.5■□□□□ 0.23
CCDC43-201ENST00000315286 ZNF593O00488 134 aaPredicted RBP16.49■□□□□ 0.23
CCDC43-201ENST00000315286 SSX4O60224 188 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 CSF3P09919 207 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 UCHL1P09936 223 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 RAB3BP20337 219 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 RANBP1P43487 201 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 MYBPHQ13203 477 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 SNTA1Q13424 505 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 SF3A2Q15428 464 aaKnown RBP16.49■□□□□ 0.23
CCDC43-201ENST00000315286 OR4K17Q8NGC6 315 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 OTOSQ8NHW6 89 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 ASB10Q8WXI3 467 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 KIAA1143Q96AT1 154 aaPredicted RBP16.49■□□□□ 0.23
CCDC43-201ENST00000315286 MAP6Q96JE9 813 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 FRMD6Q96NE9 622 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 TTYH2Q9BSA4 534 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 STRADBQ9C0K7 418 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 TMEM185BQ9H7F4 350 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 MRPL22Q9NWU5 206 aaKnown RBP16.49■□□□□ 0.23
CCDC43-201ENST00000315286 PISDQ9UG56 409 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 TMEM14AQ9Y6G1 99 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 A0A1W2PQ09 198 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 ARL6IP5O75915 188 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 SLC2A2P11168 524 aaPredicted RBP16.49■□□□□ 0.23
CCDC43-201ENST00000315286 ELK1P19419 428 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 TCN2P20062 427 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 MAGEB1P43366 347 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 EGR3Q06889 387 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 P2RY14Q15391 338 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 C6orf15Q6UXA7 325 aaPredicted RBP16.49■□□□□ 0.23
CCDC43-201ENST00000315286 CCBE1Q6UXH8 406 aaPredicted RBP16.49■□□□□ 0.23
CCDC43-201ENST00000315286 LRRC69Q6ZNQ3 347 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms