RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 BABAM2Q9NXR7 383 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 MYOTQ9UBF9 498 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 IGHV1OR21-1A0A087WYE8 117 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 RAB27BO00194 218 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 IFNA7P01567 189 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 AVPR2P30518 371 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 OR5T1Q8NG75 326 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 SLC29A1Q99808 456 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 CFHR5Q9BXR6 569 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 ACOD1A6NK06 481 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 HS3ST1O14792 307 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 TPPPO94811 219 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 KCTD20Q7Z5Y7 419 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 KISS1RQ969F8 398 aaPredicted RBP12.37□□□□□ -0.43
RFFL-201ENST00000315249 EMC7Q9NPA0 242 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 ACKR4Q9NPB9 350 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 EHFQ9NZC4 300 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 ZNF318Q5VUA4 2279 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 FOCADQ5VW36 1801 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 CEBPZOSA8MTT3 80 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 SLC34A2O95436 690 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 NID1P14543 1247 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 NXPH1P58417 271 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 SELENBP1Q13228 472 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 OR2G6Q5TZ20 316 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 PRDM6Q9NQX0 595 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 SEMA4GQ9NTN9 838 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 SLC5A6Q9Y289 635 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 SOCS6O14544 535 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 PIGAP37287 484 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 MEP1BQ16820 701 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 OR4D6Q8NGJ1 314 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 OR1L3Q8NH93 324 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 UTP4Q969X6 686 aaKnown RBP12.37□□□□□ -0.43
RFFL-201ENST00000315249 FGGYQ96C11 551 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 CACNA1GO43497 2377 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 FOXK2Q01167 660 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 TCTN1Q2MV58 587 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 MINDY2Q8NBR6 621 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 STOML3Q8TAV4 291 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 NTNG1Q9Y2I2 539 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 CCDC163A0A0D9SF12 145 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 TMEM212A6NML5 194 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 BORAQ6PGQ7 559 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 CORO6Q6QEF8 472 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 RNF170Q96K19 258 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 GMPR2Q9P2T1 348 aaKnown RBP12.36□□□□□ -0.43
RFFL-201ENST00000315249 ELAVL4P26378 380 aaKnown RBP12.36□□□□□ -0.43
RFFL-201ENST00000315249 ZNF81P51508 661 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 RIPPLY1Q0D2K3 151 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 SSPNQ14714 243 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 FCRLAQ7L513 359 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 SULF2Q8IWU5 870 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 MARVELD2Q8N4S9 558 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 CACNG6Q9BXT2 260 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 YES1P07947 543 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 GUSBP08236 651 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 BDKRB2P30411 391 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 F2RL1P55085 397 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 RPP30P78346 268 aaKnown RBP12.36□□□□□ -0.43
RFFL-201ENST00000315249 LTBQ06643 244 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 DUSP7Q16829 419 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 LCN10Q6JVE6 187 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 RBM45Q8IUH3 476 aaKnown RBP12.36□□□□□ -0.43
RFFL-201ENST00000315249 CCDC88CQ9P219 2028 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 SELENOFO60613 162 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 BCAS1O75363 584 aaPredicted RBP12.36□□□□□ -0.43
RFFL-201ENST00000315249 EIF2S3P41091 472 aaKnown RBP12.36□□□□□ -0.43
RFFL-201ENST00000315249 OR51E2Q9H255 320 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 INPP5EQ9NRR6 644 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 PCDHGA5Q9Y5G8 931 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 COL4A5P29400 1685 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 CBR3O75828 277 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 DRD3P35462 400 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 PPP5CP53041 499 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 NLRP8Q86W28 1048 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 OR56B2PQ8NGI1 322 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 MRGPRX3Q96LB0 322 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 ZNF286AQ9HBT8 521 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 EBF1Q9UH73 591 aa12.36□□□□□ -0.43
RFFL-201ENST00000315249 BMP5P22003 454 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 WIPI1Q5MNZ9 446 aaPredicted RBP12.35□□□□□ -0.43
RFFL-201ENST00000315249 TMEM200AQ86VY9 491 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 MSI2Q96DH6 328 aaKnown RBP12.35□□□□□ -0.43
RFFL-201ENST00000315249 GNRHR2Q96P88 292 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 OR2A14Q96R47 310 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 OCSTAMPQ9BR26 566 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 AMBRA1Q9C0C7 1298 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 EIF5A2Q9GZV4 153 aaKnown RBP12.35□□□□□ -0.43
RFFL-201ENST00000315249 SLC22A11Q9NSA0 550 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 RTTNQ86VV8 2226 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 RP2O75695 350 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 CDK1P06493 297 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 OR2T7P0C7T2 308 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 RPL27P61353 136 aaKnown RBP12.35□□□□□ -0.43
RFFL-201ENST00000315249 STEAP3Q658P3 488 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 GCNT2Q8N0V5 402 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 OR2T27Q8NH04 317 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 RASD1Q9Y272 281 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 HSPB11Q9Y547 144 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms