RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 ADAD1Q96M93 576 aaKnown RBP14.16□□□□□ -0.14
LSM1-201ENST00000311351 FOXB1Q99853 325 aa14.16□□□□□ -0.14
LSM1-201ENST00000311351 BARX1Q9HBU1 254 aaPredicted RBP14.16□□□□□ -0.14
LSM1-201ENST00000311351 CA10Q9NS85 328 aa14.16□□□□□ -0.14
LSM1-201ENST00000311351 ZNF224Q9NZL3 707 aa14.16□□□□□ -0.14
LSM1-201ENST00000311351 ABCD2Q9UBJ2 740 aa14.16□□□□□ -0.14
LSM1-201ENST00000311351 MED31Q9Y3C7 131 aa14.16□□□□□ -0.14
LSM1-201ENST00000311351 HIVEP2P31629 2446 aa14.16□□□□□ -0.14
LSM1-201ENST00000311351 SONP18583 2426 aaKnown RBP14.15□□□□□ -0.14
LSM1-201ENST00000311351 IGHV2OR16-5A0A0B4J2B6 119 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 H7C417 338 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 SERPINA1P01009 418 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 IFNW1P05000 195 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 PGA4P0DJD7 388 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 PGA3P0DJD8 388 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 THRBP10828 461 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 CD79AP11912 226 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 AQP2P41181 271 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 NUDT6P53370 316 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 GNGT1P63211 74 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 HGFACQ04756 655 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 RUNX1T1Q06455 604 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 DNM1P46Q6ZS02 220 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 ZNF627Q7L945 461 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 CPLX4Q7Z7G2 160 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 OFCC1Q8IZS5 231 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 MOSPD2Q8NHP6 518 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 GEMIN6Q8WXD5 167 aaKnown RBP14.15□□□□□ -0.14
LSM1-201ENST00000311351 ZNF566Q969W8 418 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 CMTM5Q96DZ9 223 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 SLC25A44Q96H78 314 aaPredicted RBP14.15□□□□□ -0.14
LSM1-201ENST00000311351 KCTD14Q9BQ13 255 aaPredicted RBP14.15□□□□□ -0.14
LSM1-201ENST00000311351 MAN2C1Q9NTJ4 1040 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 B3GNT2Q9NY97 397 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 GLTPQ9NZD2 209 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 ABCA1O95477 2261 aa14.15□□□□□ -0.14
LSM1-201ENST00000311351 GMNCA6NCL1 334 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 FAM171A2A8MVW0 826 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 MCIDASD6RGH6 385 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 FFAR1O14842 300 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 BCL10O95999 233 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 PAX7P23759 505 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 ARR3P36575 388 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 MYBPC1Q00872 1141 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 PIGFQ07326 219 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 ST3GAL3Q11203 375 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 GSG1Q2KHT4 349 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 MST1LQ2TV78 715 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 IFI44LQ53G44 452 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 LRFN4Q6PJG9 635 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 CBLL1Q75N03 491 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 NOXO1Q8NFA2 376 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 ASB10Q8WXI3 467 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 FAM162AQ96A26 154 aa14.14□□□□□ -0.15
LSM1-201ENST00000311351 MOV10Q9HCE1 1003 aaKnown RBP14.14□□□□□ -0.15
LSM1-201ENST00000311351 IGHV4-30-2A0A087WSY4 118 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 A0A1W2PRG6 482 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 LY6HO94772 140 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 IGF2P01344 180 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 IGHG1P01857 330 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 PATE4P0C8F1 98 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 IFI30P13284 250 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 PRDX6P30041 224 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 CLRN1P58418 232 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 CHRNB3Q05901 458 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 KRTAP1-1Q07627 177 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 RAB35Q15286 201 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 ADIPOQQ15848 244 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 SWI5Q1ZZU3 235 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 FKBP9P1Q75LS8 142 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 NRMQ8IXM6 262 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 CCDC36Q8IYA8 594 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 ZNF525Q8N782 197 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 RNF148Q8N7C7 305 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 SYT14Q8NB59 555 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 FGFBP3Q8TAT2 258 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 ZNF347Q96SE7 839 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 FNDC11Q9BVV2 318 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 REG4Q9BYZ8 158 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 INIPQ9NRY2 104 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 EGFL7Q9UHF1 273 aa14.13□□□□□ -0.15
LSM1-201ENST00000311351 ABCA2Q9BZC7 2435 aa14.12□□□□□ -0.15
LSM1-201ENST00000311351 DHHO43323 396 aa14.12□□□□□ -0.15
LSM1-201ENST00000311351 PRSS23O95084 383 aa14.12□□□□□ -0.15
LSM1-201ENST00000311351 QDPRP09417 244 aa14.12□□□□□ -0.15
LSM1-201ENST00000311351 OR4A8P0C604 315 aa14.12□□□□□ -0.15
LSM1-201ENST00000311351 TSPAN19P0C672 248 aa14.12□□□□□ -0.15
LSM1-201ENST00000311351 ZNF14P17017 642 aaPredicted RBP14.12□□□□□ -0.15
LSM1-201ENST00000311351 MAKP20794 623 aa14.12□□□□□ -0.15
LSM1-201ENST00000311351 THBS4P35443 961 aa14.12□□□□□ -0.15
LSM1-201ENST00000311351 SERPINF1P36955 418 aa14.12□□□□□ -0.15
LSM1-201ENST00000311351 GIPRP48546 466 aa14.12□□□□□ -0.15
LSM1-201ENST00000311351 PTDSS1P48651 473 aaKnown RBP14.12□□□□□ -0.15
LSM1-201ENST00000311351 SNRPD2P62316 118 aaKnown RBP14.12□□□□□ -0.15
LSM1-201ENST00000311351 SNTB2Q13425 540 aaKnown RBP14.12□□□□□ -0.15
LSM1-201ENST00000311351 TOP3AQ13472 1001 aaPredicted RBP14.12□□□□□ -0.15
LSM1-201ENST00000311351 LAPTM4AQ15012 233 aa14.12□□□□□ -0.15
LSM1-201ENST00000311351 TRAM2Q15035 370 aa14.12□□□□□ -0.15
LSM1-201ENST00000311351 KRT80Q6KB66 452 aa14.12□□□□□ -0.15
LSM1-201ENST00000311351 TSEN54Q7Z6J9 526 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms