RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 UGDHO60701 494 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 ZIC2O95409 532 aaPredicted RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 DAP3P51398 398 aaKnown RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 PLGLAQ15195 96 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 SYT6Q5T7P8 510 aaPredicted RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 FAM69BQ5VUD6 431 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 STEAP1BQ6NZ63 245 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 LIX1LQ8IVB5 337 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 NAXDQ8IW45 347 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 ABHD4Q8TB40 342 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 KATNB1Q9BVA0 655 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 PARP12Q9H0J9 701 aaKnown RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 ATP13A2Q9NQ11 1180 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 DMRT3Q9NQL9 472 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 SLC22A11Q9NSA0 550 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 CAMK2AQ9UQM7 478 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 PRRT4C9JH25 899 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 PLRG1O43660 514 aaKnown RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 SCRG1O75711 98 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 BAXQ07812 192 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 GPR18Q14330 331 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 YOD1Q5VVQ6 348 aaPredicted RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 FOXB2Q5VYV0 432 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 VRK2Q86Y07 508 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 HSD17B11Q8NBQ5 300 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 RSPRY1Q96DX4 576 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 RPP25Q9BUL9 199 aaKnown RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 TMEM231Q9H6L2 316 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 EXOSC3Q9NQT5 275 aaKnown RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 ZFP92A6NM28 416 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 TRIM77I1YAP6 450 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 TNFSF15O95150 251 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 PMS2P2O95744 297 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 MT-ND4LP03901 98 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 THBS1P07996 1170 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 IRF2P14316 349 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 NFYBP25208 207 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 IDUAP35475 653 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 NPBWR1P48145 328 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 AANATQ16613 207 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 TOR2AQ5JU69 321 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 DUSP15Q9H1R2 295 aaPredicted RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 PELI2Q9HAT8 420 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 ELOVL3Q9HB03 270 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 SLC6A20Q9NP91 592 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 KIAA1551Q9HCM1 1747 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 ANGPTL7O43827 346 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 NME1P15531 152 aaKnown RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 BCKDHBP21953 392 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 TRHRP34981 398 aaPredicted RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 SERTAD2Q14140 314 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 CNN3Q15417 329 aaKnown RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 CLPPQ16740 277 aaPredicted RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 ZMAT1Q5H9K5 638 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 PRAMEF8Q5VWM4 474 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 PRAMEF7Q5VXH5 474 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 GDPD3Q7L5L3 318 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 VASH1Q7L8A9 365 aaPredicted RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 NLGN4XQ8N0W4 816 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 C15orf54Q8N8G6 183 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 SLC6A17Q9H1V8 727 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 KCMF1Q9P0J7 381 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 LOXL2Q9Y4K0 774 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 SNX11Q9Y5W9 270 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 ACTL7AQ9Y615 435 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 BLACEA4D250 179 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 ANTXRLA6NF34 631 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 NPIPB15A6NHN6 443 aaPredicted RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 RPS19P39019 145 aaKnown RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 Q6ZNB5 142 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 PRSS45Q7RTY3 260 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 MDGA2Q7Z553 956 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 GRAMD2AQ8IUY3 354 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 TMEM217Q8N7C4 229 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 OR52I1Q8NGK6 324 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 GPR150Q8NGU9 434 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 GHSRQ92847 366 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 MAP6Q96JE9 813 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 CMSS1Q9BQ75 279 aaKnown RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 FAM103A1Q9BTL3 118 aaKnown RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 NTMT1Q9BV86 223 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 SUCNR1Q9BXA5 334 aa7.56□□□□□ -1.2
VPS41-202ENST00000310301 SIDT1Q9NXL6 827 aaKnown RBP7.56□□□□□ -1.2
VPS41-202ENST00000310301 EPOPA6NHQ4 379 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 DCTN6O00399 190 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 PMP2P02689 132 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 HMGN2P05204 90 aaKnown RBP7.55□□□□□ -1.2
VPS41-202ENST00000310301 IL1RNP18510 177 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 XCR1P46094 333 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 GPR176Q14439 515 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 SLC10A1Q14973 349 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 RANBP10Q6VN20 620 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 GTF2H5Q6ZYL4 71 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 HSD11B1LQ7Z5J1 315 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 CCDC74AQ96AQ1 378 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 UPRTQ96BW1 309 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 SLCO5A1Q9H2Y9 848 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 SPACA1Q9HBV2 294 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 ZNF443Q9Y2A4 671 aaPredicted RBP7.55□□□□□ -1.2
VPS41-202ENST00000310301 LTBP1Q14766 1721 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms