RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 PTGES3LE9PB15 166 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 F10P00742 488 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 CCL3P10147 92 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 BMP7P18075 431 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 SMSP52788 366 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 SMN1Q16637 294 aaKnown RBP9.7□□□□□ -0.86
CASP3-201ENST00000308394 RBM48Q5RL73 367 aaKnown RBP9.7□□□□□ -0.86
CASP3-201ENST00000308394 SLC22A10Q63ZE4 541 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 H3F3CQ6NXT2 135 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 SLC27A4Q6P1M0 643 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 OAFQ86UD1 273 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 DND1Q8IYX4 353 aaKnown RBP9.7□□□□□ -0.86
CASP3-201ENST00000308394 OR13C2Q8NGS9 318 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 OR5H6Q8NGV6 325 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 LRRC20Q8TCA0 184 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 CHPT1Q8WUD6 406 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 TMEM234Q8WY98 164 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 OSTF1Q92882 214 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 MARVELD3Q96A59 401 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 DNAJA3Q96EY1 480 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 IL4I1Q96RQ9 567 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 FAM212BQ9NTI7 297 aaPredicted RBP9.7□□□□□ -0.86
CASP3-201ENST00000308394 OSGIN1Q9UJX0 560 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 PCSK5Q92824 1860 aa9.7□□□□□ -0.86
CASP3-201ENST00000308394 TRAV27A0A087WT01 109 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 TRABD2BA6NFA1 517 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 ANKUB1A6NFN9 424 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 MARCH11A6NNE9 402 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 LRRN3E7EW58 273 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 G3V3Y1 287 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 XPNPEP2O43895 674 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 SLC25A12O75746 678 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 DXOO77932 396 aaKnown RBP9.69□□□□□ -0.86
CASP3-201ENST00000308394 CH25HO95992 272 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 APOA1P02647 267 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 LIPFP07098 398 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 OR4E1P0C645 316 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 THBS2P35442 1172 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 RPL35P42766 123 aaKnown RBP9.69□□□□□ -0.86
CASP3-201ENST00000308394 AKR1D1P51857 326 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 TAS2R60P59551 318 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 OC90Q02509 493 aaPredicted RBP9.69□□□□□ -0.86
CASP3-201ENST00000308394 SRSF6Q13247 344 aaKnown RBP9.69□□□□□ -0.86
CASP3-201ENST00000308394 SLX4IPQ5VYV7 408 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 LAIR2Q6ISS4 152 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 ACSM5Q6NUN0 579 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 ZNF620Q6ZNG0 422 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 TUSC5Q8IXB3 177 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 BEST3Q8N1M1 668 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 ARMC10Q8N2F6 343 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 OR8D4Q8NGM9 314 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 RNF138Q8WVD3 245 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 PSMF1Q92530 271 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 SGTBQ96EQ0 304 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 SAMD8Q96LT4 415 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 JSRP1Q96MG2 331 aaPredicted RBP9.69□□□□□ -0.86
CASP3-201ENST00000308394 CITED4Q96RK1 184 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 YTHDF1Q9BYJ9 559 aaKnown RBP9.69□□□□□ -0.86
CASP3-201ENST00000308394 ACTR6Q9GZN1 396 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 OR52D1Q9H346 318 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 PLCXD1Q9NUJ7 323 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 ZNF226Q9NYT6 803 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 B4DXG7 233 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 SLC1A7O00341 560 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 WISP1O95388 367 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 GSTP1P09211 210 aaKnown RBP9.69□□□□□ -0.86
CASP3-201ENST00000308394 CRHBPP24387 322 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 MSX1P28360 303 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 MECP2P51608 486 aaKnown RBP9.69□□□□□ -0.86
CASP3-201ENST00000308394 ZNF41P51814 821 aaPredicted RBP9.69□□□□□ -0.86
CASP3-201ENST00000308394 POLR2HP52434 150 aaKnown RBP9.69□□□□□ -0.86
CASP3-201ENST00000308394 CDK5Q00535 292 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 AIMP2Q13155 320 aaKnown RBP9.69□□□□□ -0.86
CASP3-201ENST00000308394 SNAPC1Q16533 368 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 BROXQ5VW32 411 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 GRINAQ7Z429 371 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 MDGA2Q7Z553 956 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 CCDC103Q8IW40 242 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 LRRC17Q8N6Y2 441 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 TCEANCQ8N8B7 351 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 OR52L1Q8NGH7 329 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 RHOXF1Q8NHV9 184 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 FBLIM1Q8WUP2 373 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 APH1BQ8WW43 257 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 MRPL48Q96GC5 212 aaKnown RBP9.69□□□□□ -0.86
CASP3-201ENST00000308394 CDH10Q9Y6N8 788 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 IGKV1D-42A0A075B6H8 117 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 TMED7-TICAM2A0A0A6YYA0 188 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 WBP4O75554 376 aaKnown RBP9.69□□□□□ -0.86
CASP3-201ENST00000308394 SMIM18P0DKX4 95 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 HNF1AP20823 631 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 CDKN1BP46527 198 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 CYB561P49447 251 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 SUMO3P55854 103 aaPredicted RBP9.69□□□□□ -0.86
CASP3-201ENST00000308394 FOXC1Q12948 553 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 TOP3AQ13472 1001 aaPredicted RBP9.69□□□□□ -0.86
CASP3-201ENST00000308394 RTP5Q14D33 572 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 ABHD17BQ5VST6 288 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 OR4K17Q8NGC6 315 aa9.69□□□□□ -0.86
CASP3-201ENST00000308394 PAQR8Q8TEZ7 354 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms