RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 CTXN1P60606 82 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 ACTA2P62736 377 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 ACTG2P63267 376 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 POU4F2Q12837 409 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 OR5M10Q6IEU7 315 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 ZNF550Q7Z398 422 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 C16orf52Q8NHV5 167 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 RLN3Q8WXF3 142 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 ELSPBP1Q96BH3 223 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 INTS12Q96CB8 462 aaKnown RBP12.26□□□□□ -0.45
CTDP1-202ENST00000299543 JAM3Q9BX67 310 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 NRIP3Q9NQ35 241 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 PNO1Q9NRX1 252 aaKnown RBP12.26□□□□□ -0.45
CTDP1-202ENST00000299543 CHRNA9Q9UGM1 479 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 CDC14CA4D256 554 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 A6NCN8 305 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 HLA-DQA2P01906 255 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 S100A6P06703 90 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 C4BPBP20851 252 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 VEGFCP49767 419 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 SHHQ15465 462 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 NPSR1Q6W5P4 371 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 PDZD9Q8IXQ8 264 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 ZNF563Q8TA94 476 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 THEM6Q8WUY1 208 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 GAL3ST4Q96RP7 486 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 ALG12Q9BV10 488 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 ULBP3Q9BZM4 244 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 TCF7L1Q9HCS4 588 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 CYP8B1Q9UNU6 501 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 ENTPD2Q9Y5L3 495 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 C7orf66A4D0T2 115 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 TMEM200CA6NKL6 621 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 ZNF879B4DU55 563 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 ZFPL1O95159 310 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 POU2F2P09086 479 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 ITPKBP27987 946 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 STARP49675 285 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 UBE2MP61081 183 aaKnown RBP12.26□□□□□ -0.45
CTDP1-202ENST00000299543 KCNAB1Q14722 419 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 RPL22L1Q6P5R6 122 aaKnown RBP12.26□□□□□ -0.45
CTDP1-202ENST00000299543 OR51Q1Q8NH59 317 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 ZDHHC1Q8WTX9 485 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 NSMAFQ92636 917 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 PELOQ9BRX2 385 aaKnown RBP12.26□□□□□ -0.45
CTDP1-202ENST00000299543 SEMA4CQ9C0C4 833 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 FBXL21Q9UKT6 434 aa12.26□□□□□ -0.45
CTDP1-202ENST00000299543 MEIKINA0A087WXM9 373 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 C11orf98E9PRG8 122 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 CLDN4O14493 209 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 SIGLEC6O43699 453 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 SDC3O75056 442 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 RNH1P13489 461 aaKnown RBP12.25□□□□□ -0.45
CTDP1-202ENST00000299543 CDKN2AP42771 156 aaKnown RBP12.25□□□□□ -0.45
CTDP1-202ENST00000299543 NANOS3P60323 173 aaKnown RBP12.25□□□□□ -0.45
CTDP1-202ENST00000299543 CBLN3Q6UW01 205 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 APOOLQ6UXV4 268 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 OR1S1Q8NH92 325 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 ADAMTS14Q8WXS8 1223 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 CTHRC1Q96CG8 243 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 MAP3K3Q99759 626 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 GABRG3Q99928 467 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 OR8D2Q9GZM6 311 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 ABRACLQ9P1F3 81 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 FANCMQ8IYD8 2048 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 MEIS3P1A6NDR6 274 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 ZNF593O00488 134 aaPredicted RBP12.25□□□□□ -0.45
CTDP1-202ENST00000299543 ARPC1BO15143 372 aaKnown RBP12.25□□□□□ -0.45
CTDP1-202ENST00000299543 SEMA4FO95754 770 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 FGF2P09038 288 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 SPP1P10451 314 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 DIO1P49895 249 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 GPR143P51810 404 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 NPEPL1Q8NDH3 523 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 OR6N2Q8NGY6 317 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 DPYSL5Q9BPU6 564 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 RXFP3Q9NSD7 469 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 DZANK1Q9NVP4 752 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 KIF25Q9UIL4 384 aa12.25□□□□□ -0.45
CTDP1-202ENST00000299543 MRPS33Q9Y291 106 aaKnown RBP12.25□□□□□ -0.45
CTDP1-202ENST00000299543 MUC22E2RYF6 1773 aaPredicted RBP12.25□□□□□ -0.45
CTDP1-202ENST00000299543 SERINC4A6NH21 518 aa12.24□□□□□ -0.45
CTDP1-202ENST00000299543 C17orf51A8MQB3 221 aa12.24□□□□□ -0.45
CTDP1-202ENST00000299543 PIN1P1O15428 100 aa12.24□□□□□ -0.45
CTDP1-202ENST00000299543 LY86O95711 162 aa12.24□□□□□ -0.45
CTDP1-202ENST00000299543 THEGLP0DJG4 465 aa12.24□□□□□ -0.45
CTDP1-202ENST00000299543 GAAP10253 952 aa12.24□□□□□ -0.45
CTDP1-202ENST00000299543 HOXB1P14653 301 aaPredicted RBP12.24□□□□□ -0.45
CTDP1-202ENST00000299543 ADH7P40394 386 aa12.24□□□□□ -0.45
CTDP1-202ENST00000299543 RAB13P51153 203 aa12.24□□□□□ -0.45
CTDP1-202ENST00000299543 MMP15P51511 669 aa12.24□□□□□ -0.45
CTDP1-202ENST00000299543 RPS11P62280 158 aaKnown RBP eCLIP12.24□□□□□ -0.45
CTDP1-202ENST00000299543 FHL1Q13642 323 aa12.24□□□□□ -0.45
CTDP1-202ENST00000299543 GSG1Q2KHT4 349 aa12.24□□□□□ -0.45
CTDP1-202ENST00000299543 TMEM69Q5SWH9 247 aa12.24□□□□□ -0.45
CTDP1-202ENST00000299543 TMPRSS12Q86WS5 348 aa12.24□□□□□ -0.45
CTDP1-202ENST00000299543 SLC22A18ASQ8N1D0 253 aa12.24□□□□□ -0.45
CTDP1-202ENST00000299543 SYNPRQ8TBG9 265 aa12.24□□□□□ -0.45
CTDP1-202ENST00000299543 MOGAT1Q96PD6 335 aa12.24□□□□□ -0.45
CTDP1-202ENST00000299543 NRSN2Q9GZP1 204 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms