RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ABCA3Q99758 1704 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 OR5K3A6NET4 321 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 C1orf196B1AJZ1 125 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 GPR171O14626 319 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 PLA2G10O15496 165 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 SELENOFO60613 162 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 SOD1P00441 154 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 ZDHHC11BP0C7U3 371 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 OPRD1P41143 372 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 CCR9P51686 369 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 MVDP53602 400 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 AANATQ16613 207 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 YIF1BQ5BJH7 314 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 TECPR1Q7Z6L1 1165 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 RPS19BP1Q86WX3 136 aaKnown RBP12.35□□□□□ -0.43
HPS3-201ENST00000296051 ZNF683Q8IZ20 524 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 GPR32P1Q8NGA4 272 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 NRIP3Q9NQ35 241 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 ACOXLQ9NUZ1 547 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 PLEK2Q9NYT0 353 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 ADAM18Q9Y3Q7 739 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 HRH3Q9Y5N1 445 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 V9GYH0 126 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 EP400Q96L91 3159 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 TRBV5-3A0A0A0MS03 114 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 TRIM64A6NGJ6 449 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 SLC33A1O00400 549 aaPredicted RBP12.35□□□□□ -0.43
HPS3-201ENST00000296051 LCMT2O60294 686 aaKnown RBP12.35□□□□□ -0.43
HPS3-201ENST00000296051 PRAMEF4O60810 478 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 FPR3P25089 353 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 FASLGP48023 281 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 SRSF5Q13243 272 aaKnown RBP12.35□□□□□ -0.43
HPS3-201ENST00000296051 PRAMEF9Q5VWM5 478 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 LILRA6Q6PI73 481 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 C6orf15Q6UXA7 325 aaPredicted RBP12.35□□□□□ -0.43
HPS3-201ENST00000296051 SPRED2Q7Z698 418 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 TMEM178AQ8NBL3 297 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 OR51S1Q8NGJ8 323 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 THOC3Q96J01 351 aaKnown RBP12.35□□□□□ -0.43
HPS3-201ENST00000296051 CNTNAP3BQ96NU0 1288 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 ZNF649Q9BS31 505 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 ZNF768Q9H5H4 540 aaKnown RBP12.35□□□□□ -0.43
HPS3-201ENST00000296051 C14orf166Q9Y224 244 aaKnown RBP12.35□□□□□ -0.43
HPS3-201ENST00000296051 ZNF281Q9Y2X9 895 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 KCNE3Q9Y6H6 103 aa12.35□□□□□ -0.43
HPS3-201ENST00000296051 MPIG6BO95866 241 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 AMY2BP19961 511 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 OR10R2Q8NGX6 335 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 RNF170Q96K19 258 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 PLA2G2FQ9BZM2 168 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 KIR3DX1Q9H7L2 352 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 UBQLN4Q9NRR5 601 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 C2orf42Q9NWW7 574 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 PCDHB10Q9UN67 800 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 LOXL2Q9Y4K0 774 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 CACNA1BQ00975 2339 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 MN1Q10571 1320 aaPredicted RBP12.34□□□□□ -0.43
HPS3-201ENST00000296051 COL4A5P29400 1685 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 SSC5DA1L4H1 1573 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 TRBV5-4A0A0C4DH59 114 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 PRKNO60260 465 aaPredicted RBP12.34□□□□□ -0.43
HPS3-201ENST00000296051 GMDSO60547 372 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 LIMS3P0CW19 117 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 LIMS4P0CW20 117 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 DCTDP32321 178 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 RAB2AP61019 212 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 DYRK1AQ13627 763 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 RBMS2Q15434 407 aaKnown RBP12.34□□□□□ -0.43
HPS3-201ENST00000296051 OR6M1Q8NGM8 313 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 MIXL1Q9H2W2 232 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 BIN3Q9NQY0 253 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 PLEKHB1Q9UF11 243 aaPredicted RBP12.34□□□□□ -0.43
HPS3-201ENST00000296051 RGS13O14921 159 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 SNRNP70P08621 437 aaKnown RBP12.34□□□□□ -0.43
HPS3-201ENST00000296051 CSF1P09603 554 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 MAGEB1P43366 347 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 RAE1P78406 368 aaKnown RBP12.34□□□□□ -0.43
HPS3-201ENST00000296051 DEFB109BQ30KR1 87 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 TIGD3Q6B0B8 471 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 RPL22L1Q6P5R6 122 aaKnown RBP12.34□□□□□ -0.43
HPS3-201ENST00000296051 OR1J4Q8NGS1 313 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 CHAC2Q8WUX2 184 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 UCN3Q969E3 161 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 RASD2Q96D21 266 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 PHB2Q99623 299 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 NUDT22Q9BRQ3 303 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 ZDHHC5Q9C0B5 715 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 A0A1W2PR48 441 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 PLSCR5A0PG75 271 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 TMEM82A0PJX8 343 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 GALR3O60755 368 aaPredicted RBP12.34□□□□□ -0.43
HPS3-201ENST00000296051 HOXB5P09067 269 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 SRMP19623 302 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 CXCL3P19876 107 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 RAB6AP20340 208 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 CYB561P49447 251 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 CSNK1G2P78368 415 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 TRMT12Q53H54 448 aaKnown RBP12.34□□□□□ -0.43
HPS3-201ENST00000296051 UBE2NLQ5JXB2 153 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 RHOUQ7L0Q8 258 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms