RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 ZAR1LA6NP61 321 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 H3BMQ9 156 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 RGS10O43665 173 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 EDNRAP25101 427 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 UQCRFS1P47985 274 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 BIDP55957 195 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 FOXF2Q12947 444 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 EIF2S3LQ2VIR3 472 aaKnown RBP13.46□□□□□ -0.26
CCDC140-201ENST00000295226 PGGHGQ32M88 737 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 ANKDD1AQ495B1 522 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 CARD17Q5XLA6 110 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 SLC27A4Q6P1M0 643 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 PRSS48Q7RTY5 328 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 FAM122BQ7Z309 247 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 MCEMP1Q8IX19 187 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 SLC43A2Q8N370 569 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 OR2T33Q8NG76 320 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 CNIH3Q8TBE1 160 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 RORBQ92753 470 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 WNT2BQ93097 391 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 COG8Q96MW5 612 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 PCNX1Q96RV3 2341 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 TP63Q9H3D4 680 aaPredicted RBP13.46□□□□□ -0.26
CCDC140-201ENST00000295226 NOX1Q9Y5S8 564 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 FLVCR1Q9Y5Y0 555 aa13.46□□□□□ -0.26
CCDC140-201ENST00000295226 ESPL1Q14674 2120 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 FREM1Q5H8C1 2179 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 TEX13CA0A0J9YWL9 993 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 LOC102725191A0A1B0GVB3 256 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 SLC35F4A4IF30 521 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 CD8B2A6NJW9 211 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 ZNF99A8MXY4 864 aaPredicted RBP13.45□□□□□ -0.26
CCDC140-201ENST00000295226 PTGES3LE9PB15 166 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 H7C1C5 153 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 VAMP5O95183 116 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 BCL10O95999 233 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 HTR1AP08908 422 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 GLI4P10075 376 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 HIST1H1CP16403 213 aaKnown RBP13.45□□□□□ -0.26
CCDC140-201ENST00000295226 GNLYP22749 145 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 NOS3P29474 1203 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 LCN6P62502 163 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 SIRPAP78324 504 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 LGALS3BPQ08380 585 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 PMPCAQ10713 525 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 CAMK2DQ13557 499 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 RPL13AP3Q6NVV1 102 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 NUFIP2Q7Z417 695 aaKnown RBP13.45□□□□□ -0.26
CCDC140-201ENST00000295226 OR4K13Q8NH42 304 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 FCGR1BQ92637 280 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 GPX7Q96SL4 187 aaPredicted RBP13.45□□□□□ -0.26
CCDC140-201ENST00000295226 TTYH2Q9BSA4 534 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 SF3B5Q9BWJ5 86 aaKnown RBP13.45□□□□□ -0.26
CCDC140-201ENST00000295226 TXNIPQ9H3M7 391 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 FANCFQ9NPI8 374 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 TVP23BQ9NYZ1 205 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 KLHL9Q9P2J3 617 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 GRHPRQ9UBQ7 328 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 AASSQ9UDR5 926 aa13.45□□□□□ -0.26
CCDC140-201ENST00000295226 FAM20BO75063 409 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 PCMT1P22061 227 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 ACVR1BP36896 505 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 SELENOPP49908 381 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 SMSP52788 366 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 SLC16A1P53985 500 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 RPL27P61353 136 aaKnown RBP13.44□□□□□ -0.26
CCDC140-201ENST00000295226 RNPS1Q15287 305 aaKnown RBP13.44□□□□□ -0.26
CCDC140-201ENST00000295226 POU4F3Q15319 338 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 ARMC4Q5T2S8 1044 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 PTCHD4Q6ZW05 846 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 CCDC71Q8IV32 467 aaPredicted RBP13.44□□□□□ -0.26
CCDC140-201ENST00000295226 LNX2Q8N448 690 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 SYT14Q8NB59 555 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 NAXEQ8NCW5 288 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 ZNF540Q8NDQ6 660 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 OR52E2Q8NGJ4 325 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 ASB10Q8WXI3 467 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 MYDGFQ969H8 173 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 CCDC90BQ9GZT6 254 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 C12orf49Q9H741 205 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 GPR52Q9Y2T5 361 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 FAM208BQ5VWN6 2430 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 PHF3Q92576 2039 aaKnown RBP13.44□□□□□ -0.26
CCDC140-201ENST00000295226 INTS1Q8N201 2190 aaKnown RBP13.44□□□□□ -0.26
CCDC140-201ENST00000295226 MBD3L4A6NDZ8 208 aaPredicted RBP13.44□□□□□ -0.26
CCDC140-201ENST00000295226 MBD3L3A6NE82 208 aaPredicted RBP13.44□□□□□ -0.26
CCDC140-201ENST00000295226 MBD3L5A6NJ08 208 aaPredicted RBP13.44□□□□□ -0.26
CCDC140-201ENST00000295226 PYCARD-AS1I3L0S3 204 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 ARHGEF9O43307 516 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 YES1P07947 543 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 FCGR2AP12318 317 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 FMO3P31513 532 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 PTGER4P35408 488 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 CDKN2AP42771 156 aaKnown RBP13.44□□□□□ -0.26
CCDC140-201ENST00000295226 PER3P56645 1201 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 CDC42P60953 191 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 SF3B4Q15427 424 aaKnown RBP eCLIP13.44□□□□□ -0.26
CCDC140-201ENST00000295226 MESTQ5EB52 335 aa13.44□□□□□ -0.26
CCDC140-201ENST00000295226 ZNF362Q5T0B9 420 aaPredicted RBP13.44□□□□□ -0.26
CCDC140-201ENST00000295226 SLX4IPQ5VYV7 408 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms