RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 ACADSP16219 412 aa23.6■■□□□ 1.37
SSU72-201ENST00000291386 ERFP50548 548 aa23.6■■□□□ 1.37
SSU72-201ENST00000291386 RUNX1T1Q06455 604 aa23.6■■□□□ 1.37
SSU72-201ENST00000291386 PPP1R8Q12972 351 aaKnown RBP23.6■■□□□ 1.37
SSU72-201ENST00000291386 SEZ6L2Q6UXD5 910 aa23.6■■□□□ 1.37
SSU72-201ENST00000291386 ZNF627Q7L945 461 aa23.6■■□□□ 1.37
SSU72-201ENST00000291386 OR9Q2Q8NGE9 314 aa23.6■■□□□ 1.37
SSU72-201ENST00000291386 BCL2L2Q92843 193 aaPredicted RBP23.6■■□□□ 1.37
SSU72-201ENST00000291386 MUCL1Q96DR8 90 aa23.6■■□□□ 1.37
SSU72-201ENST00000291386 ULBP2Q9BZM5 246 aa23.6■■□□□ 1.37
SSU72-201ENST00000291386 NRIP3Q9NQ35 241 aa23.6■■□□□ 1.37
SSU72-201ENST00000291386 DNAJB9Q9UBS3 223 aa23.6■■□□□ 1.37
SSU72-201ENST00000291386 SLC25A15Q9Y619 301 aa23.6■■□□□ 1.37
SSU72-201ENST00000291386 U3KQV3 271 aa23.6■■□□□ 1.37
SSU72-201ENST00000291386 ARRDC5A6NEK1 342 aa23.59■■□□□ 1.37
SSU72-201ENST00000291386 ZNF99A8MXY4 864 aaPredicted RBP23.59■■□□□ 1.37
SSU72-201ENST00000291386 HRGP04196 525 aa23.59■■□□□ 1.37
SSU72-201ENST00000291386 ZNF133P52736 654 aaPredicted RBP23.59■■□□□ 1.37
SSU72-201ENST00000291386 PPA1Q15181 289 aa23.59■■□□□ 1.37
SSU72-201ENST00000291386 ANKRD16Q6P6B7 361 aa23.59■■□□□ 1.37
SSU72-201ENST00000291386 SMARCD3Q6STE5 483 aa23.59■■□□□ 1.37
SSU72-201ENST00000291386 FAM122BQ7Z309 247 aa23.59■■□□□ 1.37
SSU72-201ENST00000291386 IGFN1Q86VF2 1251 aa23.59■■□□□ 1.37
SSU72-201ENST00000291386 WFDC8Q8IUA0 241 aa23.59■■□□□ 1.37
SSU72-201ENST00000291386 WDR31Q8NA23 367 aa23.59■■□□□ 1.37
SSU72-201ENST00000291386 NOXO1Q8NFA2 376 aa23.59■■□□□ 1.37
SSU72-201ENST00000291386 ZNF519Q8TB69 540 aa23.59■■□□□ 1.37
SSU72-201ENST00000291386 ZNF837Q96EG3 531 aaPredicted RBP23.59■■□□□ 1.37
SSU72-201ENST00000291386 TSPAN32Q96QS1 320 aa23.59■■□□□ 1.37
SSU72-201ENST00000291386 KATNB1Q9BVA0 655 aa23.59■■□□□ 1.37
SSU72-201ENST00000291386 POLDIP3Q9BY77 421 aaKnown RBP23.59■■□□□ 1.37
SSU72-201ENST00000291386 NGBQ9NPG2 151 aa23.59■■□□□ 1.37
SSU72-201ENST00000291386 OBP2BQ9NPH6 170 aa23.59■■□□□ 1.37
SSU72-201ENST00000291386 AMDHD2Q9Y303 409 aa23.59■■□□□ 1.37
SSU72-201ENST00000291386 GNGT2O14610 69 aa23.58■■□□□ 1.37
SSU72-201ENST00000291386 SIAH2O43255 324 aa23.58■■□□□ 1.37
SSU72-201ENST00000291386 GASTP01350 101 aa23.58■■□□□ 1.37
SSU72-201ENST00000291386 PAX7P23759 505 aa23.58■■□□□ 1.37
SSU72-201ENST00000291386 RPL4P36578 427 aaKnown RBP23.58■■□□□ 1.37
SSU72-201ENST00000291386 ARF1P84077 181 aaKnown RBP23.58■■□□□ 1.37
SSU72-201ENST00000291386 BEX5Q5H9J7 111 aa23.58■■□□□ 1.37
SSU72-201ENST00000291386 LRFN4Q6PJG9 635 aa23.58■■□□□ 1.37
SSU72-201ENST00000291386 THSD4Q6ZMP0 1018 aa23.58■■□□□ 1.37
SSU72-201ENST00000291386 DPY19L2P2Q6ZN68 376 aa23.58■■□□□ 1.37
SSU72-201ENST00000291386 ARIH2OSQ8N7S6 290 aa23.58■■□□□ 1.37
SSU72-201ENST00000291386 HDAC2Q92769 488 aaKnown RBP23.58■■□□□ 1.37
SSU72-201ENST00000291386 KCNK17Q96T54 332 aa23.58■■□□□ 1.37
SSU72-201ENST00000291386 ALG12Q9BV10 488 aa23.58■■□□□ 1.37
SSU72-201ENST00000291386 DGCR6LQ9BY27 220 aa23.58■■□□□ 1.37
SSU72-201ENST00000291386 NELFAQ9H3P2 528 aa23.58■■□□□ 1.37
SSU72-201ENST00000291386 MGAT4BQ9UQ53 548 aa23.58■■□□□ 1.37
SSU72-201ENST00000291386 DCHS2Q6V1P9 2916 aa23.57■■□□□ 1.36
SSU72-201ENST00000291386 A6NIZ1 184 aa23.57■■□□□ 1.36
SSU72-201ENST00000291386 NR2C1P13056 603 aa23.57■■□□□ 1.36
SSU72-201ENST00000291386 LOXP28300 417 aaPredicted RBP23.57■■□□□ 1.36
SSU72-201ENST00000291386 ACVR1BP36896 505 aa23.57■■□□□ 1.36
SSU72-201ENST00000291386 CLRN1P58418 232 aa23.57■■□□□ 1.36
SSU72-201ENST00000291386 ACTR3P61158 418 aa23.57■■□□□ 1.36
SSU72-201ENST00000291386 RAP1BP61224 184 aa23.57■■□□□ 1.36
SSU72-201ENST00000291386 RAP1AP62834 184 aa23.57■■□□□ 1.36
SSU72-201ENST00000291386 ERVK-25P63136 954 aa23.57■■□□□ 1.36
SSU72-201ENST00000291386 GABPB1Q06547 395 aaPredicted RBP23.57■■□□□ 1.36
SSU72-201ENST00000291386 RFX4Q33E94 735 aa23.57■■□□□ 1.36
SSU72-201ENST00000291386 TBRG1Q3YBR2 411 aa23.57■■□□□ 1.36
SSU72-201ENST00000291386 FNDC8Q8TC99 324 aa23.57■■□□□ 1.36
SSU72-201ENST00000291386 GIPC3Q8TF64 312 aa23.57■■□□□ 1.36
SSU72-201ENST00000291386 NMD3Q96D46 503 aaKnown RBP23.57■■□□□ 1.36
SSU72-201ENST00000291386 OR52D1Q9H346 318 aa23.57■■□□□ 1.36
SSU72-201ENST00000291386 ARPC4-TTLL3A0A0A6YYG9 625 aa23.56■■□□□ 1.36
SSU72-201ENST00000291386 DEAF1O75398 565 aaPredicted RBP23.56■■□□□ 1.36
SSU72-201ENST00000291386 APEHP13798 732 aaKnown RBP23.56■■□□□ 1.36
SSU72-201ENST00000291386 CDH2P19022 906 aaPredicted RBP23.56■■□□□ 1.36
SSU72-201ENST00000291386 TOP3AQ13472 1001 aaPredicted RBP23.56■■□□□ 1.36
SSU72-201ENST00000291386 GPR139Q6DWJ6 353 aa23.56■■□□□ 1.36
SSU72-201ENST00000291386 RPL13AP3Q6NVV1 102 aa23.56■■□□□ 1.36
SSU72-201ENST00000291386 ZNF620Q6ZNG0 422 aa23.56■■□□□ 1.36
SSU72-201ENST00000291386 TMEM179BQ7Z7N9 219 aa23.56■■□□□ 1.36
SSU72-201ENST00000291386 AQP11Q8NBQ7 271 aa23.56■■□□□ 1.36
SSU72-201ENST00000291386 OR10G2Q8NGC3 310 aa23.56■■□□□ 1.36
SSU72-201ENST00000291386 FANK1Q8TC84 345 aa23.56■■□□□ 1.36
SSU72-201ENST00000291386 MCHR2Q969V1 340 aa23.56■■□□□ 1.36
SSU72-201ENST00000291386 SMURF2Q9HAU4 748 aa23.56■■□□□ 1.36
SSU72-201ENST00000291386 GRHPRQ9UBQ7 328 aa23.56■■□□□ 1.36
SSU72-201ENST00000291386 POFUT2Q9Y2G5 429 aa23.56■■□□□ 1.36
SSU72-201ENST00000291386 ADAM18Q9Y3Q7 739 aa23.56■■□□□ 1.36
SSU72-201ENST00000291386 AP4S1Q9Y587 144 aa23.56■■□□□ 1.36
SSU72-201ENST00000291386 ABCA4P78363 2273 aa23.56■■□□□ 1.36
SSU72-201ENST00000291386 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.55■■□□□ 1.36
SSU72-201ENST00000291386 DHHO43323 396 aa23.55■■□□□ 1.36
SSU72-201ENST00000291386 TIPRLO75663 272 aa23.55■■□□□ 1.36
SSU72-201ENST00000291386 TXNDC12O95881 172 aa23.55■■□□□ 1.36
SSU72-201ENST00000291386 QDPRP09417 244 aa23.55■■□□□ 1.36
SSU72-201ENST00000291386 GSTM3P21266 225 aa23.55■■□□□ 1.36
SSU72-201ENST00000291386 HOXC12P31275 282 aa23.55■■□□□ 1.36
SSU72-201ENST00000291386 IST1P53990 364 aa23.55■■□□□ 1.36
SSU72-201ENST00000291386 NR1H2P55055 460 aa23.55■■□□□ 1.36
SSU72-201ENST00000291386 HIKESHIQ53FT3 197 aa23.55■■□□□ 1.36
SSU72-201ENST00000291386 C10orf128Q5T292 105 aa23.55■■□□□ 1.36
SSU72-201ENST00000291386 CD300LDQ6UXZ3 194 aa23.55■■□□□ 1.36
SSU72-201ENST00000291386 RASSF6Q6ZTQ3 369 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms