RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 OR4N5Q8IXE1 308 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 TEX19Q8NA77 164 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 OR9A4Q8NGU2 314 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 FNDC9Q8TBE3 224 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 BMFQ96LC9 184 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 HIST1H2AAQ96QV6 131 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 RBP7Q96R05 134 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 ZNF587Q96SQ5 575 aaPredicted RBP10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 KATNB1Q9BVA0 655 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 MTHFD2LQ9H903 347 aaPredicted RBP10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 C12orf10Q9HB07 376 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 USP36Q9P275 1121 aaKnown RBP10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 CACNA1CQ13936 2221 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 NDUFB2O95178 105 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 CCL7P80098 99 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 REEP5Q00765 189 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 GAB1Q13480 694 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 HMGN3Q15651 99 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 SYPL1Q16563 259 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 PDZD11Q5EBL8 140 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 ZNF683Q8IZ20 524 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 NAA11Q9BSU3 229 aaPredicted RBP10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 C20orf24Q9BUV8 137 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 MED20Q9H944 212 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 IER3IP1Q9Y5U9 82 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 FAM230AA0A1W2PPH8 454 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 P2RX6O15547 441 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 CYTIPO60759 359 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 DNAJB6O75190 326 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 HIST1H1TP22492 207 aaPredicted RBP10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 ZNF705AQ6ZN79 300 aaPredicted RBP10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 SHISA6Q6ZSJ9 500 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 BEND4Q6ZU67 534 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 KIAA0907Q7Z7F0 614 aaPredicted RBP10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 SPNS2Q8IVW8 549 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 TMEM178AQ8NBL3 297 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 RSC1A1Q92681 617 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 TOMM40LQ969M1 308 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 ASB6Q9NWX5 421 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 UBE2J1Q9Y385 318 aaPredicted RBP10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 MRPS2Q9Y399 296 aaKnown RBP10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 ADAM18Q9Y3Q7 739 aa10.48□□□□□ -0.73
NPC1L1-201ENST00000289547 A0A1B0GTQ1 180 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 GPX2P18283 190 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 ZP3P21754 424 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 SLC6A19Q695T7 634 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 DHRS13Q6UX07 377 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 RCBTB1Q8NDN9 531 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 TMEM239Q8WW34 195 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 OR14A2Q96R54 314 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 TMEM231Q9H6L2 316 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 INPP5EQ9NRR6 644 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 ZFP57Q9NU63 452 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 BOKQ9UMX3 212 aaPredicted RBP10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 TDRD15B5MCY1 1934 aaKnown RBP10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 TRBV11-1A0A0K0K1C0 115 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 HMGB3O15347 200 aaKnown RBP10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 PRKAR1BP31321 381 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 PTGER1P34995 402 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 DRD3P35462 400 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 DGCR2P98153 550 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 COL9A2Q14055 689 aaPredicted RBP10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 EBPQ15125 230 aaKnown RBP10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 OR14L1PQ8NHC6 308 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 LKAAEAR1Q8TD35 194 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 UBTD2Q8WUN7 234 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 OPALINQ96PE5 141 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 FOXE1O00358 373 aaPredicted RBP10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 CASC3O15234 703 aaKnown RBP10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 HMGN2P05204 90 aaKnown RBP10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 TSPAN31Q12999 210 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 SLC9A3R2Q15599 337 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 NNATQ16517 81 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 CDRT4Q8N9R6 151 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 GLYATL2Q8WU03 294 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 HAS2Q92819 552 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 P2RY12Q9H244 342 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 SCN1AP35498 2009 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 ANTXRLA6NF34 631 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 TUBAL3A6NHL2 446 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 ETV5P41161 510 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 TSFMP43897 325 aaKnown RBP10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 RAB4BP61018 213 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 SNTB1Q13884 538 aaKnown RBP10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 TMEM207Q6UWW9 146 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 SLC30A7Q8NEW0 376 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 RAB3CQ96E17 227 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 MS4A4EQ96PG1 132 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 NDUFB11Q9NX14 153 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 B3GALT1Q9Y5Z6 326 aa10.47□□□□□ -0.73
NPC1L1-201ENST00000289547 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 TNFSF12O43508 249 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 RGS11O94810 467 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 MPIG6BO95866 241 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 MTHFD2P13995 350 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 CTXN1P60606 82 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 SNRPGP62308 76 aaKnown RBP10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 FOXK1P85037 733 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 SLC14A1Q13336 389 aa10.46□□□□□ -0.73
NPC1L1-201ENST00000289547 XKR7Q5GH72 579 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms