RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 MCIDASD6RGH6 385 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 NPIPB9F8W1W9 429 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 AP4M1O00189 453 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 PPIHO43447 177 aaKnown RBP11.97□□□□□ -0.49
NUP54-201ENST00000264883 RCBTB2O95199 551 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 SLC34A2O95436 690 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 CD2P06729 351 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 HOXC4P09017 264 aaPredicted RBP11.97□□□□□ -0.49
NUP54-201ENST00000264883 POU2F2P09086 479 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 FXYD6P3P58550 94 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 CSNK1G2P78368 415 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 ZIC1Q15915 447 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 LY6G5CQ5SRR4 150 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 C9orf64Q5T6V5 341 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 RPL22L1Q6P5R6 122 aaKnown RBP11.97□□□□□ -0.49
NUP54-201ENST00000264883 C2orf73Q8N5S3 287 aaPredicted RBP11.97□□□□□ -0.49
NUP54-201ENST00000264883 POMGNT2Q8NAT1 580 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 INO80EQ8NBZ0 244 aaPredicted RBP11.97□□□□□ -0.49
NUP54-201ENST00000264883 OR5AP2Q8NGF4 316 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 OR10R2Q8NGX6 335 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 PHYHIPQ92561 330 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 SEC22AQ96IW7 307 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 CD180Q99467 661 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 MENTQ9BUN1 341 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 RAB11FIP5Q9BXF6 653 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 LAT2Q9GZY6 243 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 TOLLIPQ9H0E2 274 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 SFXN1Q9H9B4 322 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 CMC2Q9NRP2 79 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 ASH2LQ9UBL3 628 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 CCL26Q9Y258 94 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 YBX2Q9Y2T7 364 aaKnown RBP11.97□□□□□ -0.49
NUP54-201ENST00000264883 A0A1W2PPV9 198 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 METTL21EPA6NDL7 271 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 SLC31A2O15432 143 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 SPINT1O43278 529 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 NARSO43776 548 aaKnown RBP11.97□□□□□ -0.49
NUP54-201ENST00000264883 ERAL1O75616 437 aaKnown RBP11.97□□□□□ -0.49
NUP54-201ENST00000264883 RHOP08100 348 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 SFTA3P0C7M3 94 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 C6P13671 934 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 TPT1P13693 172 aaKnown RBP11.97□□□□□ -0.49
NUP54-201ENST00000264883 ATP1B3P54709 279 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 FOXK2Q01167 660 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 SRSF4Q08170 494 aaKnown RBP11.97□□□□□ -0.49
NUP54-201ENST00000264883 ALKBH1Q13686 389 aaKnown RBP11.97□□□□□ -0.49
NUP54-201ENST00000264883 TMEM52BQ4KMG9 183 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 LIPNQ5VXI9 398 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 ETV3LQ6ZN32 361 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 TMED4Q7Z7H5 227 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 RANBP3LQ86VV4 465 aaPredicted RBP11.97□□□□□ -0.49
NUP54-201ENST00000264883 SLC43A2Q8N370 569 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 SDR9C7Q8NEX9 313 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 NUP43Q8NFH3 380 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 PPP1R1CQ8WVI7 109 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 RHOVQ96L33 236 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 MTHFD2LQ9H903 347 aaPredicted RBP11.97□□□□□ -0.49
NUP54-201ENST00000264883 RHOFQ9HBH0 211 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 UPB1Q9UBR1 384 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 ETV7Q9Y603 341 aa11.97□□□□□ -0.49
NUP54-201ENST00000264883 GXYLT2A0PJZ3 443 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 C9orf170A2RU37 121 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 K7ESM1 405 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 TERTO14746 1132 aaKnown RBP11.96□□□□□ -0.49
NUP54-201ENST00000264883 ITGB2P05107 769 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 GYPBP06028 91 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 CD1AP06126 327 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 HIST1H1TP22492 207 aaPredicted RBP11.96□□□□□ -0.49
NUP54-201ENST00000264883 AVPR2P30518 371 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 AKR1C3P42330 323 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 TAS2R60P59551 318 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 GPM6BQ13491 265 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 GAS6Q14393 721 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 OR7A5Q15622 319 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 POM121L1PQ3SYA9 428 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 OR10K2Q6IF99 312 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 LPCAT3Q6P1A2 487 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 SLC48A1Q6P1K1 146 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 ADAMTSL4Q6UY14 1074 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 ZNF614Q8N883 585 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 OR10H5Q8NGA6 315 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 MYLIPQ8WY64 445 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 ZG16BQ96DA0 208 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 PIK3IP1Q96FE7 263 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 COX14Q96I36 57 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 HS6ST2Q96MM7 605 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 HAO2Q9NYQ3 351 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 FBXL4Q9UKA2 621 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 ATXN7L1Q9ULK2 861 aaPredicted RBP11.96□□□□□ -0.49
NUP54-201ENST00000264883 SLC7A7Q9UM01 511 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 ZNF443Q9Y2A4 671 aaPredicted RBP11.96□□□□□ -0.49
NUP54-201ENST00000264883 HCFC2Q9Y5Z7 792 aa11.96□□□□□ -0.49
NUP54-201ENST00000264883 CDH23Q9H251 3354 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 CCSO14618 274 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 CD74P04233 296 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 THBS1P07996 1170 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 F3P13726 295 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 NDUFB7P17568 137 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 SLC2A5P22732 501 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 CD34P28906 385 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms