RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 CD79AP11912 226 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 B4GALT1P15291 398 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 UGT2B15P54855 530 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 PPP2R2BQ00005 443 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 LIPEQ05469 1076 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 PIGFQ07326 219 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 EFNB3Q15768 340 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 GSG1Q2KHT4 349 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 VHLLQ6RSH7 139 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 NANOGNBQ7Z5D8 188 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 ZNF525Q8N782 197 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 PFN4Q8NHR9 129 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 TMEM239Q8WW34 195 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 LIPHQ8WWY8 451 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 ZNF566Q969W8 418 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 SGTBQ96EQ0 304 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 HOPXQ9BPY8 73 aaPredicted RBP13.93□□□□□ -0.18
USE1-201ENST00000263897 DENND2DQ9H6A0 471 aaPredicted RBP13.93□□□□□ -0.18
USE1-201ENST00000263897 ZNF442Q9H7R0 627 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 ZNF224Q9NZL3 707 aa13.93□□□□□ -0.18
USE1-201ENST00000263897 GMPR2Q9P2T1 348 aaKnown RBP13.93□□□□□ -0.18
USE1-201ENST00000263897 A0A096LNT2 108 aa13.92□□□□□ -0.18
USE1-201ENST00000263897 OR7A10O76100 309 aa13.92□□□□□ -0.18
USE1-201ENST00000263897 THBS4P35443 961 aa13.92□□□□□ -0.18
USE1-201ENST00000263897 SNRPD2P62316 118 aaKnown RBP13.92□□□□□ -0.18
USE1-201ENST00000263897 RAB1AP62820 205 aa13.92□□□□□ -0.18
USE1-201ENST00000263897 RPL18Q07020 188 aaKnown RBP13.92□□□□□ -0.18
USE1-201ENST00000263897 ST3GAL3Q11203 375 aa13.92□□□□□ -0.18
USE1-201ENST00000263897 MELKQ14680 651 aa13.92□□□□□ -0.18
USE1-201ENST00000263897 TREML1Q86YW5 311 aa13.92□□□□□ -0.18
USE1-201ENST00000263897 SKA3Q8IX90 412 aa13.92□□□□□ -0.18
USE1-201ENST00000263897 NANOS1Q8WY41 292 aaKnown RBP13.92□□□□□ -0.18
USE1-201ENST00000263897 LZICQ8WZA0 190 aa13.92□□□□□ -0.18
USE1-201ENST00000263897 FAM168AQ92567 244 aa13.92□□□□□ -0.18
USE1-201ENST00000263897 PLK3Q9H4B4 646 aa13.92□□□□□ -0.18
USE1-201ENST00000263897 NOX3Q9HBY0 568 aa13.92□□□□□ -0.18
USE1-201ENST00000263897 C20orf141Q9NUB4 165 aa13.92□□□□□ -0.18
USE1-201ENST00000263897 A4GNTQ9UNA3 340 aa13.92□□□□□ -0.18
USE1-201ENST00000263897 MED31Q9Y3C7 131 aa13.92□□□□□ -0.18
USE1-201ENST00000263897 A0A1W2PRG6 482 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 HTR3EA5X5Y0 456 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 NME4O00746 187 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 DHHO43323 396 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 GPRIN2O60269 458 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 LY6HO94772 140 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 TP53P04637 393 aaPredicted RBP13.91□□□□□ -0.18
USE1-201ENST00000263897 F13BP05160 661 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 QDPRP09417 244 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 TSPAN19P0C672 248 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 PGA4P0DJD7 388 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 PGA3P0DJD8 388 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 SLC25A16P16260 332 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 ZNF14P17017 642 aaPredicted RBP13.91□□□□□ -0.18
USE1-201ENST00000263897 NPR2P20594 1047 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 NR4A1P22736 598 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 AQP2P41181 271 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 GIPRP48546 466 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 DAG1Q14118 895 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 LAPTM4AQ15012 233 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 HIST3H3Q16695 136 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 C8orf82Q6P1X6 216 aaPredicted RBP13.91□□□□□ -0.18
USE1-201ENST00000263897 HACD2Q6Y1H2 254 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 SPATA21Q7Z572 469 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 C10orf105Q8TEF2 133 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 MS4A3Q96HJ5 214 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 SORCS2Q96PQ0 1159 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 DOK1Q99704 481 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 VRK1Q99986 396 aaPredicted RBP13.91□□□□□ -0.18
USE1-201ENST00000263897 ELAC2Q9BQ52 826 aaKnown RBP13.91□□□□□ -0.18
USE1-201ENST00000263897 MRPL13Q9BYD1 178 aaKnown RBP13.91□□□□□ -0.18
USE1-201ENST00000263897 INIPQ9NRY2 104 aa13.91□□□□□ -0.18
USE1-201ENST00000263897 FBXO9Q9UK97 447 aaPredicted RBP13.91□□□□□ -0.18
USE1-201ENST00000263897 TMEM129A0AVI4 362 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 CXCR6O00574 342 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 CD5LO43866 347 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 IGHG1P01857 330 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 CSF3P09919 207 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 OR8G3PP0DMU2 310 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 ZNF35P13682 527 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 IFNA8P32881 189 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 PTDSS1P48651 473 aaKnown RBP13.9□□□□□ -0.18
USE1-201ENST00000263897 SLC7A2P52569 658 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 SEC24CP53992 1094 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 RUNX1T1Q06455 604 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 LOXL1Q08397 574 aaPredicted RBP13.9□□□□□ -0.18
USE1-201ENST00000263897 VTCN1Q7Z7D3 282 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 SLC22A24Q8N4F4 322 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 MOSPD2Q8NHP6 518 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 FGFBP3Q8TAT2 258 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 PRRC1Q96M27 445 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 TNFRSF13CQ96RJ3 184 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 MYLK2Q9H1R3 596 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 TMEM38BQ9NVV0 291 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 SNX13Q9Y5W8 968 aa13.9□□□□□ -0.18
USE1-201ENST00000263897 CENPBD1B2RD01 187 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 MCIDASD6RGH6 385 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 hCG_2039718K7EN88 272 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 NDUFAB1O14561 156 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 GSTA4O15217 222 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 TLX2O43763 284 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms