RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 PARP12Q9H0J9 701 aaKnown RBP13.21□□□□□ -0.29
CUX2-201ENST00000261726 WDR76Q9H967 626 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 LANCL2Q9NS86 450 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 MYH1P12882 1939 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 SLC46A3Q7Z3Q1 461 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 UBAC2Q8NBM4 344 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 GHSRQ92847 366 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 SLC46A2Q9BY10 475 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 TBPP20226 339 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 TSPAN31Q12999 210 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 ZNRF4Q8WWF5 429 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 ITPKCQ96DU7 683 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 PIGQQ9BRB3 760 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 NT5DC2Q9H857 520 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 SERINC4A6NH21 518 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 KRBOX1C9JBD0 128 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 TPOP07202 933 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 SLC10A3P09131 477 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 DHRS4L1P0CG22 281 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 TCN2P20062 427 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 RRADP55042 308 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 LPCAT3Q6P1A2 487 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 ZNF813Q6ZN06 617 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 TMEM106AQ96A25 262 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 C1QTNF6Q9BXI9 259 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 NMES1Q9C002 83 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 SLAMF8Q9P0V8 285 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 V9GYS6 101 aa13.21□□□□□ -0.3
CUX2-201ENST00000261726 SHANK3Q9BYB0 1731 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 H3BNC9 293 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 LGALS8O00214 317 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 CNR1P21554 472 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 AOAHP28039 575 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 NECAP2Q9NVZ3 263 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 ADAM23O75077 832 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 NPY4RP50391 375 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 GABREP78334 506 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 OR10K2Q6IF99 312 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 MED25Q71SY5 747 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 DPPA2Q7Z7J5 298 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 FAM109AQ8N4B1 249 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.2□□□□□ -0.3
CUX2-201ENST00000261726 ISG20Q96AZ6 181 aaKnown RBP13.2□□□□□ -0.3
CUX2-201ENST00000261726 ZNF597Q96LX8 424 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 LRIT2A6NDA9 550 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 WNT11O96014 354 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 HOXD12P35452 270 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 MMP12P39900 470 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 RAB13P51153 203 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 SOHLH1Q5JUK2 328 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 OR6V1Q8N148 313 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 KCNG3Q8TAE7 436 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 NIPSNAP3BQ9BS92 247 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 B3GAT1Q9P2W7 334 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 USP22Q9UPT9 525 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 DEGS1O15121 323 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 ANGPTL7O43827 346 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 GNB2P62879 340 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 FAM74A1Q5RGS3 127 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 PLPP7Q8NBV4 271 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 POFUT1Q9H488 388 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 ISYNA1Q9NPH2 558 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 HTRA3P83110 453 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 TVP23CQ96ET8 276 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 WASH6PQ9NQA3 447 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 OR52A1Q9UKL2 312 aa13.2□□□□□ -0.3
CUX2-201ENST00000261726 IGHV3-64DA0A0J9YX35 117 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 BTBD17A6NE02 478 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 CHEK1O14757 476 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 HLA-FP30511 346 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 ZNF93P35789 620 aaPredicted RBP13.19□□□□□ -0.3
CUX2-201ENST00000261726 HMGN3Q15651 99 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 TAZQ16635 292 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 HTR3DQ70Z44 454 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 ZNF454Q8N9F8 522 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 TRAV36DV7A0A075B6V5 113 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 ARHGAP33O14559 1287 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 CCR6P51684 374 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 UBE2G1P62253 170 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 PXT1Q8NFP0 134 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 TMEM255BQ8WV15 326 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 FAM103A1Q9BTL3 118 aaKnown RBP13.19□□□□□ -0.3
CUX2-201ENST00000261726 MYH11P35749 1972 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 PDZD11Q5EBL8 140 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 SFXN4Q6P4A7 337 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 CD300LGQ6UXG3 332 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 MARCH3Q86UD3 253 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 SLC22A24Q8N4F4 322 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 CACNA1SQ13698 1873 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 RRP8O43159 456 aaKnown RBP13.19□□□□□ -0.3
CUX2-201ENST00000261726 RAB35Q15286 201 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 IAH1Q2TAA2 248 aaPredicted RBP13.19□□□□□ -0.3
CUX2-201ENST00000261726 H2BFWTQ7Z2G1 175 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 KCNIP2Q9NS61 270 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 MOKQ9UQ07 419 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 MYO5AQ9Y4I1 1855 aaKnown RBP13.19□□□□□ -0.3
CUX2-201ENST00000261726 TMEM221A6NGB7 291 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 CALCBP10092 127 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 C15orf39Q6ZRI6 1047 aa13.19□□□□□ -0.3
CUX2-201ENST00000261726 SSX9Q7RTT3 188 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms