RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 GABRB1P18505 474 aa18.36■□□□□ 0.53
RTCA-201ENST00000260563 BMP5P22003 454 aa18.36■□□□□ 0.53
RTCA-201ENST00000260563 SDHAP31040 664 aa18.36■□□□□ 0.53
RTCA-201ENST00000260563 KIR2DL2P43627 348 aaPredicted RBP18.36■□□□□ 0.53
RTCA-201ENST00000260563 EFNB1P98172 346 aa18.36■□□□□ 0.53
RTCA-201ENST00000260563 POU3F1Q03052 451 aaPredicted RBP18.36■□□□□ 0.53
RTCA-201ENST00000260563 TOP3AQ13472 1001 aaPredicted RBP18.36■□□□□ 0.53
RTCA-201ENST00000260563 C1DQ13901 141 aaKnown RBP18.36■□□□□ 0.53
RTCA-201ENST00000260563 EEF1A1P5Q5VTE0 462 aa18.36■□□□□ 0.53
RTCA-201ENST00000260563 VWA1Q6PCB0 445 aa18.36■□□□□ 0.53
RTCA-201ENST00000260563 OR6K3Q8NGY3 331 aa18.36■□□□□ 0.53
RTCA-201ENST00000260563 CNIH3Q8TBE1 160 aa18.36■□□□□ 0.53
RTCA-201ENST00000260563 APH1BQ8WW43 257 aa18.36■□□□□ 0.53
RTCA-201ENST00000260563 IL4I1Q96RQ9 567 aa18.36■□□□□ 0.53
RTCA-201ENST00000260563 CMC2Q9NRP2 79 aa18.36■□□□□ 0.53
RTCA-201ENST00000260563 AASSQ9UDR5 926 aa18.36■□□□□ 0.53
RTCA-201ENST00000260563 ZNF346Q9UL40 294 aaKnown RBP18.36■□□□□ 0.53
RTCA-201ENST00000260563 NOSIPQ9Y314 301 aaKnown RBP18.36■□□□□ 0.53
RTCA-201ENST00000260563 LOC102725191A0A1B0GVB3 256 aa18.35■□□□□ 0.53
RTCA-201ENST00000260563 TLX2O43763 284 aaPredicted RBP18.35■□□□□ 0.53
RTCA-201ENST00000260563 TXNDC12O95881 172 aa18.35■□□□□ 0.53
RTCA-201ENST00000260563 IFNGP01579 166 aa18.35■□□□□ 0.53
RTCA-201ENST00000260563 SNRPGP62308 76 aaKnown RBP18.35■□□□□ 0.53
RTCA-201ENST00000260563 CDK5R2Q13319 367 aa18.35■□□□□ 0.53
RTCA-201ENST00000260563 ACKR1Q16570 336 aa18.35■□□□□ 0.53
RTCA-201ENST00000260563 GPR139Q6DWJ6 353 aa18.35■□□□□ 0.53
RTCA-201ENST00000260563 MRGPRGQ86SM5 289 aa18.35■□□□□ 0.53
RTCA-201ENST00000260563 FAM26EQ8N5C1 309 aa18.35■□□□□ 0.53
RTCA-201ENST00000260563 TMEM163Q8TC26 289 aa18.35■□□□□ 0.53
RTCA-201ENST00000260563 ZNF775Q96BV0 537 aaPredicted RBP18.35■□□□□ 0.53
RTCA-201ENST00000260563 Q96M85 177 aa18.35■□□□□ 0.53
RTCA-201ENST00000260563 TXNIPQ9H3M7 391 aa18.35■□□□□ 0.53
RTCA-201ENST00000260563 KLHL21Q9UJP4 597 aa18.35■□□□□ 0.53
RTCA-201ENST00000260563 GPR52Q9Y2T5 361 aa18.35■□□□□ 0.53
RTCA-201ENST00000260563 NOX1Q9Y5S8 564 aa18.35■□□□□ 0.53
RTCA-201ENST00000260563 TEX13CA0A0J9YWL9 993 aa18.34■□□□□ 0.53
RTCA-201ENST00000260563 RIIAD1A6NNX1 92 aa18.34■□□□□ 0.53
RTCA-201ENST00000260563 HIST1H1CP16403 213 aaKnown RBP18.34■□□□□ 0.53
RTCA-201ENST00000260563 ZNF3P17036 446 aa18.34■□□□□ 0.53
RTCA-201ENST00000260563 RPL27P61353 136 aaKnown RBP18.34■□□□□ 0.53
RTCA-201ENST00000260563 UGT2A3Q6UWM9 527 aa18.34■□□□□ 0.53
RTCA-201ENST00000260563 CREB3L2Q70SY1 520 aa18.34■□□□□ 0.53
RTCA-201ENST00000260563 ZNF808Q8N4W9 903 aaPredicted RBP18.34■□□□□ 0.53
RTCA-201ENST00000260563 OR4K13Q8NH42 304 aa18.34■□□□□ 0.53
RTCA-201ENST00000260563 CA5BP1Q8WTZ4 195 aa18.34■□□□□ 0.53
RTCA-201ENST00000260563 RASD2Q96D21 266 aa18.34■□□□□ 0.53
RTCA-201ENST00000260563 C12orf49Q9H741 205 aa18.34■□□□□ 0.53
RTCA-201ENST00000260563 PROCRQ9UNN8 238 aa18.34■□□□□ 0.53
RTCA-201ENST00000260563 NPIPB13A6NJU9 1138 aa18.33■□□□□ 0.53
RTCA-201ENST00000260563 NPIPB4C9JG80 1138 aa18.33■□□□□ 0.53
RTCA-201ENST00000260563 AKAP8O43823 692 aaKnown RBP18.33■□□□□ 0.53
RTCA-201ENST00000260563 WBP4O75554 376 aaKnown RBP18.33■□□□□ 0.53
RTCA-201ENST00000260563 AGAP20933 346 aa18.33■□□□□ 0.53
RTCA-201ENST00000260563 DAP3P51398 398 aaKnown RBP18.33■□□□□ 0.53
RTCA-201ENST00000260563 TEKQ02763 1124 aa18.33■□□□□ 0.53
RTCA-201ENST00000260563 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.33■□□□□ 0.53
RTCA-201ENST00000260563 CACNA1CQ13936 2221 aa18.33■□□□□ 0.53
RTCA-201ENST00000260563 FREM1Q5H8C1 2179 aa18.33■□□□□ 0.53
RTCA-201ENST00000260563 ZNF362Q5T0B9 420 aaPredicted RBP18.33■□□□□ 0.53
RTCA-201ENST00000260563 NUFIP2Q7Z417 695 aaKnown RBP18.33■□□□□ 0.53
RTCA-201ENST00000260563 OR52E2Q8NGJ4 325 aa18.33■□□□□ 0.53
RTCA-201ENST00000260563 ITLN2Q8WWU7 325 aaPredicted RBP18.33■□□□□ 0.53
RTCA-201ENST00000260563 TMEM45BQ96B21 275 aa18.33■□□□□ 0.53
RTCA-201ENST00000260563 STARD4Q96DR4 205 aa18.33■□□□□ 0.53
RTCA-201ENST00000260563 ZNF385AQ96PM9 386 aaKnown RBP18.33■□□□□ 0.53
RTCA-201ENST00000260563 PIGMQ9H3S5 423 aa18.33■□□□□ 0.53
RTCA-201ENST00000260563 FN3KQ9H479 309 aa18.33■□□□□ 0.53
RTCA-201ENST00000260563 TRAF3IP2O43734 574 aaPredicted RBP18.33■□□□□ 0.52
RTCA-201ENST00000260563 MRPL33O75394 65 aaKnown RBP18.33■□□□□ 0.52
RTCA-201ENST00000260563 SMNDC1O75940 238 aaKnown RBP eCLIP18.33■□□□□ 0.52
RTCA-201ENST00000260563 IFNGR1P15260 489 aa18.33■□□□□ 0.52
RTCA-201ENST00000260563 ACVR1BP36896 505 aa18.33■□□□□ 0.52
RTCA-201ENST00000260563 CLDN17P56750 224 aa18.33■□□□□ 0.52
RTCA-201ENST00000260563 KRR1Q13601 381 aaKnown RBP18.33■□□□□ 0.52
RTCA-201ENST00000260563 MELKQ14680 651 aa18.33■□□□□ 0.52
RTCA-201ENST00000260563 MESTQ5EB52 335 aa18.33■□□□□ 0.52
RTCA-201ENST00000260563 SLC25A30Q5SVS4 291 aa18.33■□□□□ 0.52
RTCA-201ENST00000260563 C6orf141Q5SZD1 244 aa18.33■□□□□ 0.52
RTCA-201ENST00000260563 LAIR2Q6ISS4 152 aa18.33■□□□□ 0.52
RTCA-201ENST00000260563 XKRXQ6PP77 449 aa18.33■□□□□ 0.52
RTCA-201ENST00000260563 SLC35D2Q76EJ3 337 aa18.33■□□□□ 0.52
RTCA-201ENST00000260563 LIX1LQ8IVB5 337 aa18.33■□□□□ 0.52
RTCA-201ENST00000260563 ZNF786Q8N393 782 aa18.33■□□□□ 0.52
RTCA-201ENST00000260563 RELL2Q8NC24 303 aaPredicted RBP18.33■□□□□ 0.52
RTCA-201ENST00000260563 SDR9C7Q8NEX9 313 aa18.33■□□□□ 0.52
RTCA-201ENST00000260563 LRR1Q96L50 414 aa18.33■□□□□ 0.52
RTCA-201ENST00000260563 NR1H4Q96RI1 486 aaPredicted RBP18.33■□□□□ 0.52
RTCA-201ENST00000260563 CLN6Q9NWW5 311 aa18.33■□□□□ 0.52
RTCA-201ENST00000260563 FLNCQ14315 2725 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 FAM90A27PA6NNH2 459 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 EEF1E1-BLOC1S5C9J1V9 151 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 EEF1E1O43324 174 aaKnown RBP18.32■□□□□ 0.52
RTCA-201ENST00000260563 BCL10O95999 233 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 CHN2P52757 468 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 SRSF1Q07955 248 aaKnown RBP eCLIP18.32■□□□□ 0.52
RTCA-201ENST00000260563 CRMP1Q14194 572 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 SLC25A35Q3KQZ1 300 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 ARMC4Q5T2S8 1044 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 MEDAGQ5VYS4 303 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 NHLRC1Q6VVB1 395 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms