RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 CCR9P51686 369 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 TUSC1Q2TAM9 212 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 SCGB2B2Q4G0G5 96 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 OR5M10Q6IEU7 315 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 NHLRC1Q6VVB1 395 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 MED25Q71SY5 747 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 BTN2A1Q7KYR7 527 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 TAF8Q7Z7C8 310 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 TMEM151BQ8IW70 566 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 OR6M1Q8NGM8 313 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 RBM18Q96H35 190 aaKnown RBP9.18□□□□□ -0.94
COPB1-201ENST00000249923 GSX2Q9BZM3 304 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 ZNF768Q9H5H4 540 aaKnown RBP9.18□□□□□ -0.94
COPB1-201ENST00000249923 WDR76Q9H967 626 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 ZMAT3Q9HA38 289 aaKnown RBP9.18□□□□□ -0.94
COPB1-201ENST00000249923 MKKSQ9NPJ1 570 aaPredicted RBP9.18□□□□□ -0.94
COPB1-201ENST00000249923 SDHAF2Q9NX18 166 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 ZNF337Q9Y3M9 751 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 PCDHGA5Q9Y5G8 931 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 RPS10-NUDT3A0A1W2PQS6 291 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 EFCAB7A8K855 629 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 B4DGG1 531 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 TNFP01375 233 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 HLA-DQA2P01906 255 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 AKT2P31751 481 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 CCINQ13939 588 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 C1QL3Q5VWW1 255 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 LIN54Q6MZP7 749 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 LRRTM1Q86UE6 522 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 FOXRED2Q8IWF2 684 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 OR6V1Q8N148 313 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 C2CD4CQ8TF44 421 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 WNT2BQ93097 391 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 MRPL38Q96DV4 380 aaKnown RBP9.18□□□□□ -0.94
COPB1-201ENST00000249923 LRFN5Q96NI6 719 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 TSPAN32Q96QS1 320 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 OR2M2Q96R28 347 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 ELF4Q99607 663 aaPredicted RBP9.18□□□□□ -0.94
COPB1-201ENST00000249923 LPAR4Q99677 370 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 KCNK15Q9H427 330 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 MMP25Q9NPA2 562 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 COPZ2Q9P299 210 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 FOXJ3Q9UPW0 622 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 HIF3AQ9Y2N7 669 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 ASXL3Q9C0F0 2248 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 A0A1B0GVI7 797 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 TVP23AA6NH52 213 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 ARL6IP5O75915 188 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 GLCEO94923 617 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 AKR7A3O95154 331 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 WNT11O96014 354 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 ACSM4P0C7M7 580 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 ZNF806P0C7X5 589 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 MAOBP27338 520 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 DCTDP32321 178 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 RAD52P43351 418 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 GFERP55789 205 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 TOMM34Q15785 309 aaPredicted RBP9.18□□□□□ -0.94
COPB1-201ENST00000249923 TMEM65Q6PI78 240 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 ZNF550Q7Z398 422 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 PRSS35Q8N3Z0 413 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 PTPMT1Q8WUK0 201 aaPredicted RBP9.18□□□□□ -0.94
COPB1-201ENST00000249923 DVL3Q92997 716 aaPredicted RBP9.18□□□□□ -0.94
COPB1-201ENST00000249923 TMEM185BQ9H7F4 350 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 PLEKHA1Q9HB21 404 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 GMEB2Q9UKD1 530 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 ZNF281Q9Y2X9 895 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 HS3ST3A1Q9Y663 406 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 AUP1Q9Y679 476 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 TNRC18O15417 2968 aaPredicted RBP9.17□□□□□ -0.94
COPB1-201ENST00000249923 KIR2DS5A0A0G2JLQ3 304 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 A0A0G2JNG1 304 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 KIR2DS3K7RE56 304 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 PRAMEF2O60811 474 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 SERPINA3P01011 423 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 RD3LP0DJH9 198 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 GPR143P51810 404 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 PUDPQ08623 228 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 KIR2DS5Q14953 304 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 TAF13Q15543 124 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 ZNHIT3Q15649 155 aaPredicted RBP9.17□□□□□ -0.94
COPB1-201ENST00000249923 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.17□□□□□ -0.94
COPB1-201ENST00000249923 HACD4Q5VWC8 232 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 LIPNQ5VXI9 398 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 STAC2Q6ZMT1 411 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 LRRC69Q6ZNQ3 347 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 PARGQ86W56 976 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 OOSP2Q86WS3 158 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 SLC43A2Q8N370 569 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 SEC22AQ96IW7 307 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 SORCS2Q96PQ0 1159 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 PPA2Q9H2U2 334 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 Q9N2J8 555 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 SLC39A1Q9NY26 324 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 PIPOXQ9P0Z9 390 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 CD207Q9UJ71 328 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 PLEKHA6Q9Y2H5 1048 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 ZNF749O43361 778 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 TPOP07202 933 aa9.17□□□□□ -0.94
COPB1-201ENST00000249923 THEGLP0DJG4 465 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms