RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 TTYH2Q9BSA4 534 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 MROQ9BYG7 248 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 CDCP1Q9H5V8 836 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 GRHPRQ9UBQ7 328 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 TMEM5Q9Y2B1 443 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 PKDREJQ9NTG1 2253 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 CACNA1DQ01668 2161 aa7.82□□□□□ -1.16
VPS4B-201ENST00000238497 SHISA3A0PJX4 238 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 TMEM72A0PK05 275 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 BLACEA4D250 179 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 SLC22A31A6NKX4 558 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 ZNF264O43296 627 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 CCNKO75909 580 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 KRT8P05787 483 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 SBK2P0C263 348 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 OR8G3PP0DMU2 310 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 MYL9P24844 172 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 MRPS15P82914 257 aaKnown RBP7.81□□□□□ -1.16
VPS4B-201ENST00000238497 ALG10Q5BKT4 473 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 TMEM201Q5SNT2 666 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 TMEM205Q6UW68 189 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 BEST3Q8N1M1 668 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 TMEM156Q8N614 296 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 GALNT11Q8NCW6 608 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 UTP23Q9BRU9 249 aaKnown RBP7.81□□□□□ -1.16
VPS4B-201ENST00000238497 ZNF700Q9H0M5 742 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 MYEF2Q9P2K5 600 aaKnown RBP7.81□□□□□ -1.16
VPS4B-201ENST00000238497 EXTL2Q9UBQ6 330 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 UBR5O95071 2799 aaPredicted RBP7.81□□□□□ -1.16
VPS4B-201ENST00000238497 DOPEY1Q5JWR5 2465 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 CPEP16870 476 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 DRD5P21918 477 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 TALDO1P37837 337 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 ARFIP1P53367 373 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 PMP22Q01453 160 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 PRKCDQ05655 676 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 SERTAD2Q14140 314 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 MELKQ14680 651 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 EXT1Q16394 746 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 ACSM3Q53FZ2 586 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 CD300LDQ6UXZ3 194 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 RPS19BP1Q86WX3 136 aaKnown RBP7.81□□□□□ -1.16
VPS4B-201ENST00000238497 Q8N402 240 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 ARHGEF39Q8N4T4 335 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 YIPF7Q8N8F6 280 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 ASB15Q8WXK1 588 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 DAZLQ92904 295 aaKnown RBP7.81□□□□□ -1.16
VPS4B-201ENST00000238497 LCORQ96JN0 433 aaPredicted RBP7.81□□□□□ -1.16
VPS4B-201ENST00000238497 C5orf34Q96MH7 638 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 BCL7BQ9BQE9 202 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 NEURL2Q9BR09 285 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 SYT4Q9H2B2 425 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 MCCC2Q9HCC0 563 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 CMC2Q9NRP2 79 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 KLRF1Q9NZS2 232 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 OSGIN2Q9Y236 505 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 RPH3AQ9Y2J0 694 aaPredicted RBP7.81□□□□□ -1.16
VPS4B-201ENST00000238497 UTP20O75691 2785 aaKnown RBP7.81□□□□□ -1.16
VPS4B-201ENST00000238497 TRBV11-1A0A0K0K1C0 115 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 IRGMA1A4Y4 181 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 OR6C68A6NDL8 312 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 TRIM64BA6NI03 449 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 SAGE2PA6NJ88 616 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 KDM4EB2RXH2 506 aaPredicted RBP7.81□□□□□ -1.16
VPS4B-201ENST00000238497 BHLHE40O14503 412 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 IL7P13232 177 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 NR4A2P43354 598 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 GPR143P51810 404 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 OR2B6P58173 313 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 SLC26A5P58743 744 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 PRAMEF20Q5VT98 475 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 ZCCHC12Q6PEW1 402 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 ZNF613Q6PF04 617 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 POGLUT1Q8NBL1 392 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 PSMF1Q92530 271 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 IMMP1LQ96LU5 166 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 PPIL3Q9H2H8 161 aaKnown RBP7.81□□□□□ -1.16
VPS4B-201ENST00000238497 LANCL2Q9NS86 450 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 ACOXLQ9NUZ1 547 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 MED11Q9P086 117 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 NLKQ9UBE8 527 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 RASD1Q9Y272 281 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 SHANK1Q9Y566 2161 aa7.81□□□□□ -1.16
VPS4B-201ENST00000238497 FAM240BA0A1B0GVZ2 78 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 OR5H15A6NDH6 313 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 XKRYO14609 159 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 GABRA5P31644 462 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 SOX8P57073 446 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 SCN1BQ07699 218 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 DMRTC1Q5HYR2 192 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 HES5Q5TA89 166 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 SPINK14Q6IE38 97 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 IGFL3Q6UXB1 125 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 DPY19L4Q7Z388 723 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 GPAT4Q86UL3 456 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 RNF113BQ8IZP6 322 aaKnown RBP7.8□□□□□ -1.16
VPS4B-201ENST00000238497 LNX2Q8N448 690 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 NR4A3Q92570 626 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 GCDHQ92947 438 aaPredicted RBP7.8□□□□□ -1.16
VPS4B-201ENST00000238497 C3orf49Q96BT1 292 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms