RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CLOCKO15516 846 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 PIP5K1CO60331 668 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 CTAG2O75638 210 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 RAD51DO75771 328 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 TSPAN19P0C672 248 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 HLA-DOBP13765 273 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 RPL4P36578 427 aaKnown RBP9.92□□□□□ -0.82
SF3B6-201ENST00000233468 ARHGDIAP52565 204 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 HMGA2P52926 109 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 IST1P53990 364 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 BIDP55957 195 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 CLRN1P58418 232 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 RAP1BP61224 184 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 RAP1AP62834 184 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 ROR2Q01974 943 aaKnown RBP9.92□□□□□ -0.82
SF3B6-201ENST00000233468 PPA1Q15181 289 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 ZBED5Q49AG3 693 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 IQCCQ4KMZ1 466 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 C1orf146Q5VVC0 180 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 CARD17Q5XLA6 110 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 OR2T5Q6IEZ7 315 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 TBPL2Q6SJ96 375 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 KLHL17Q6TDP4 642 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 WFDC8Q8IUA0 241 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 TMEM123Q8N131 208 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 OR2T29Q8NH02 315 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 OR51A7Q8NH64 312 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 POM121Q96HA1 1249 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 BOD1Q96IK1 185 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 CHID1Q9BWS9 393 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 POLDIP3Q9BY77 421 aaKnown RBP9.92□□□□□ -0.82
SF3B6-201ENST00000233468 ULBP2Q9BZM5 246 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 CLEC4MQ9H2X3 399 aaPredicted RBP9.92□□□□□ -0.82
SF3B6-201ENST00000233468 ESRP2Q9H6T0 727 aaKnown RBP9.92□□□□□ -0.82
SF3B6-201ENST00000233468 RASSF1Q9NS23 344 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 MED29Q9NX70 200 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 SLC7A8Q9UHI5 535 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 POFUT2Q9Y2G5 429 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 ANKHD1Q8IWZ3 2542 aaKnown RBP9.92□□□□□ -0.82
SF3B6-201ENST00000233468 FLNAP21333 2647 aaKnown RBP9.91□□□□□ -0.82
SF3B6-201ENST00000233468 VPS13CQ709C8 3753 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 DOCK7Q96N67 2140 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 UNC119BA6NIH7 251 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 M0R3G1 203 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 XKRYO14609 159 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 MGRN1O60291 552 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 UPK3AO75631 287 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 CCNB2O95067 398 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 NDUFB2O95178 105 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 CST1P01037 141 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 F13BP05160 661 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 ITGA5P08648 1049 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 MAKP20794 623 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 FPR3P25089 353 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 EDNRAP25101 427 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 GUCA1AP43080 201 aaPredicted RBP9.91□□□□□ -0.82
SF3B6-201ENST00000233468 GPR4P46093 362 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 OMPP47874 163 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 CTXN1P60606 82 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 UBE2NP61088 152 aaKnown RBP9.91□□□□□ -0.82
SF3B6-201ENST00000233468 RPS4XP62701 263 aaKnown RBP9.91□□□□□ -0.82
SF3B6-201ENST00000233468 CAMK2DQ13557 499 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 TAB1Q15750 504 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 GABRA6Q16445 453 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 ACKR1Q16570 336 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 RPL13AP3Q6NVV1 102 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 ANKRD16Q6P6B7 361 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 ADGRG5Q8IZF4 528 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 MAGEE2Q8TD90 523 aaPredicted RBP9.91□□□□□ -0.82
SF3B6-201ENST00000233468 GNPDA2Q8TDQ7 276 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 CANT1Q8WVQ1 401 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 FAM46AQ96IP4 442 aaKnown RBP9.91□□□□□ -0.82
SF3B6-201ENST00000233468 TXNDC15Q96J42 360 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 ALKBH3Q96Q83 286 aaPredicted RBP9.91□□□□□ -0.82
SF3B6-201ENST00000233468 RBP7Q96R05 134 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 TNFRSF13CQ96RJ3 184 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 EMC6Q9BV81 110 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 TXNIPQ9H3M7 391 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 CRLF2Q9HC73 371 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 GPR35Q9HC97 309 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 CCM2LQ9NUG4 571 aaPredicted RBP9.91□□□□□ -0.82
SF3B6-201ENST00000233468 GLTPQ9NZD2 209 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 GRHPRQ9UBQ7 328 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 SAMHD1Q9Y3Z3 626 aaKnown RBP9.91□□□□□ -0.82
SF3B6-201ENST00000233468 LYVE1Q9Y5Y7 322 aa9.91□□□□□ -0.82
SF3B6-201ENST00000233468 TRAV27A0A087WT01 109 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 TCRBV3S1A0A5B6 114 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 FAM221AA4D161 298 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 ZNF99A8MXY4 864 aaPredicted RBP9.9□□□□□ -0.82
SF3B6-201ENST00000233468 AHCYL1O43865 530 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 E2F6O75461 281 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 IGHMP01871 453 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 CD14P08571 375 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 ACADSP16219 412 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 CDH2P19022 906 aaPredicted RBP9.9□□□□□ -0.82
SF3B6-201ENST00000233468 GSTM3P21266 225 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 ZNF84P51523 738 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 RPS6KA3P51812 740 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 RPL27P61353 136 aaKnown RBP9.9□□□□□ -0.82
SF3B6-201ENST00000233468 SEC23BQ15437 767 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms