RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 SPATA2Q9UM82 520 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 LINC00854A0A1B0GVQ3 168 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 FAM240BA0A1B0GVZ2 78 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 MAGEB4O15481 346 aaPredicted RBP15.23■□□□□ 0.03
GAPDH-201ENST00000229239 FZD7O75084 574 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 UBL3O95164 117 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 RAF1P04049 648 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 EIF4EP06730 217 aaKnown RBP15.23■□□□□ 0.03
GAPDH-201ENST00000229239 SRMP19623 302 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 MSX1P28360 303 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 APOBEC1P41238 236 aaKnown RBP15.23■□□□□ 0.03
GAPDH-201ENST00000229239 COL28A1Q2UY09 1125 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 CEP78Q5JTW2 689 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 RSBN1Q5VWQ0 802 aaPredicted RBP15.23■□□□□ 0.03
GAPDH-201ENST00000229239 PAPD4Q6PIY7 484 aaKnown RBP15.23■□□□□ 0.03
GAPDH-201ENST00000229239 SHISA6Q6ZSJ9 500 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 OR4M1Q8NGD0 313 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 OR6F1Q8NGZ6 308 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 ZNF519Q8TB69 540 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 HGDQ93099 445 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 TSSK2Q96PF2 358 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 INTS14Q96SY0 518 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 WACQ9BTA9 647 aa15.23■□□□□ 0.03
GAPDH-201ENST00000229239 VSX1Q9NZR4 365 aaPredicted RBP15.23■□□□□ 0.03
GAPDH-201ENST00000229239 NPIPB13A6NJU9 1138 aa15.22■□□□□ 0.03
GAPDH-201ENST00000229239 NPIPB4C9JG80 1138 aa15.22■□□□□ 0.03
GAPDH-201ENST00000229239 UPK3AO75631 287 aa15.22■□□□□ 0.03
GAPDH-201ENST00000229239 ABHD16AO95870 558 aa15.22■□□□□ 0.03
GAPDH-201ENST00000229239 ALOX5APP20292 161 aa15.22■□□□□ 0.03
GAPDH-201ENST00000229239 PSMB10P40306 273 aa15.22■□□□□ 0.03
GAPDH-201ENST00000229239 KIR2DL3P43628 341 aa15.22■□□□□ 0.03
GAPDH-201ENST00000229239 ALKBH1Q13686 389 aaKnown RBP15.22■□□□□ 0.03
GAPDH-201ENST00000229239 SLC25A35Q3KQZ1 300 aa15.22■□□□□ 0.03
GAPDH-201ENST00000229239 BICRALQ6AI39 1079 aa15.22■□□□□ 0.03
GAPDH-201ENST00000229239 TMEM205Q6UW68 189 aa15.22■□□□□ 0.03
GAPDH-201ENST00000229239 ZNF248Q8NDW4 579 aa15.22■□□□□ 0.03
GAPDH-201ENST00000229239 OR14A2Q96R54 314 aa15.22■□□□□ 0.03
GAPDH-201ENST00000229239 THAP7Q9BT49 309 aaPredicted RBP15.22■□□□□ 0.03
GAPDH-201ENST00000229239 SDHAF3Q9NRP4 125 aa15.22■□□□□ 0.03
GAPDH-201ENST00000229239 MRM2Q9UI43 246 aaKnown RBP15.22■□□□□ 0.03
GAPDH-201ENST00000229239 ARID1BQ8NFD5 2236 aaPredicted RBP15.22■□□□□ 0.03
GAPDH-201ENST00000229239 ACACBO00763 2458 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 IGHV3-20A0A0C4DH32 117 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 A0A0G2JMP0 313 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 A0A0X1KG70 313 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 PRSS37A4D1T9 235 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 FAM171A2A8MVW0 826 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 ETV2O00321 342 aaPredicted RBP15.21■□□□□ 0.03
GAPDH-201ENST00000229239 ARHGEF9O43307 516 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 ZNF208O43345 1280 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 ORC5O43913 435 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 SLC43A1O75387 559 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 TPPPO94811 219 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 TIAF1O95411 115 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 RASGEF1BQ0VAM2 473 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 ZP4Q12836 540 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 FAM205BPQ63HN1 556 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 FDX2Q6P4F2 183 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 POMZP3Q6PJE2 187 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 LYPD4Q6UWN0 246 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 CPEB2Q7Z5Q1 589 aaKnown RBP15.21■□□□□ 0.03
GAPDH-201ENST00000229239 YIPF7Q8N8F6 280 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 OR4M2Q8NGB6 313 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 RNF166Q96A37 237 aaPredicted RBP15.21■□□□□ 0.03
GAPDH-201ENST00000229239 PDCD1LG2Q9BQ51 273 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 WDR77Q9BQA1 342 aaPredicted RBP15.21■□□□□ 0.03
GAPDH-201ENST00000229239 HDHD2Q9H0R4 259 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 SYT4Q9H2B2 425 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 RYDENQ9NUL5 291 aaKnown RBP15.21■□□□□ 0.03
GAPDH-201ENST00000229239 NXT1Q9UKK6 140 aaKnown RBP15.21■□□□□ 0.03
GAPDH-201ENST00000229239 CAMK2AQ9UQM7 478 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 RP1P56715 2156 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 CHD8Q9HCK8 2581 aa15.21■□□□□ 0.03
GAPDH-201ENST00000229239 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 A6NIZ1 184 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 TMEM212A6NML5 194 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 CENPXA8MT69 81 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 DCTN6O00399 190 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 PLPP3O14495 311 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 CTDSPLO15194 276 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 GMFGO60234 142 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 ZFPL1O95159 310 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 FAM157BP0CG42 384 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 FGF5P12034 268 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 ATF1P18846 271 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 GRPRP30550 384 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 MMP15P51511 669 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 SCAND1P57086 179 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 RAP1BP61224 184 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 RAP1AP62834 184 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 IL11RAQ14626 422 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 CARTPTQ16568 116 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 ACKR1Q16570 336 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 Q499Y3 187 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 C1QL3Q5VWW1 255 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 LIPNQ5VXI9 398 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 ZNF57Q68EA5 555 aaPredicted RBP15.2■□□□□ 0.02
GAPDH-201ENST00000229239 DBX2Q6ZNG2 339 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 NAXDQ8IW45 347 aa15.2■□□□□ 0.02
GAPDH-201ENST00000229239 OR5AK2Q8NH90 309 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms