RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 PQLC1Q8N2U9 271 aa12.9□□□□□ -0.34
PCOLCE-201ENST00000223061 C1orf162Q8NEQ5 155 aaPredicted RBP12.9□□□□□ -0.34
PCOLCE-201ENST00000223061 OR4C15Q8NGM1 316 aa12.9□□□□□ -0.34
PCOLCE-201ENST00000223061 ASB10Q8WXI3 467 aa12.9□□□□□ -0.34
PCOLCE-201ENST00000223061 ZNF837Q96EG3 531 aaPredicted RBP12.9□□□□□ -0.34
PCOLCE-201ENST00000223061 PIK3IP1Q96FE7 263 aa12.9□□□□□ -0.34
PCOLCE-201ENST00000223061 SLC25A44Q96H78 314 aaPredicted RBP12.9□□□□□ -0.34
PCOLCE-201ENST00000223061 MUS81Q96NY9 551 aa12.9□□□□□ -0.34
PCOLCE-201ENST00000223061 NR1H4Q96RI1 486 aaPredicted RBP12.9□□□□□ -0.34
PCOLCE-201ENST00000223061 POLDIP3Q9BY77 421 aaKnown RBP12.9□□□□□ -0.34
PCOLCE-201ENST00000223061 ULBP2Q9BZM5 246 aa12.9□□□□□ -0.34
PCOLCE-201ENST00000223061 CLEC4MQ9H2X3 399 aaPredicted RBP12.9□□□□□ -0.34
PCOLCE-201ENST00000223061 B3GAT2Q9NPZ5 323 aa12.9□□□□□ -0.34
PCOLCE-201ENST00000223061 RASSF1Q9NS23 344 aa12.9□□□□□ -0.34
PCOLCE-201ENST00000223061 ABCA12Q86UK0 2595 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 A0A096LPE4 126 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 A0A1W2PPZ6 126 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 KLF4O43474 513 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 SEC14L2O76054 403 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 IGHG1P01857 330 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 HRGP04196 525 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 ZNF26P17031 533 aaPredicted RBP12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 HOXC12P31275 282 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 HMGA2P52926 109 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 CLRN1P58418 232 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 PRPS1P60891 318 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 ARF1P84077 181 aaKnown RBP12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 P2RY8Q86VZ1 359 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 LRRC75AQ8NAA5 344 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 SYT14Q8NB59 555 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 OR9Q2Q8NGE9 314 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 OR1K1Q8NGR3 316 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 LRR1Q96L50 414 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 TXNIPQ9H3M7 391 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 IL20RAQ9UHF4 553 aa12.89□□□□□ -0.35
PCOLCE-201ENST00000223061 RPL36A-HNRNPH2H7BZ11 118 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 GNGT2O14610 69 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 CCNB2O95067 398 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 PGA4P0DJD7 388 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 PGA3P0DJD8 388 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 ERVK-25P63136 954 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 ARMC4Q5T2S8 1044 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 PGBD2Q6P3X8 592 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 KLHL24Q6TFL4 600 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 HDDC2Q7Z4H3 204 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 WDR31Q8NA23 367 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 FANK1Q8TC84 345 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 TMEM54Q969K7 222 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 SLCO4A1Q96BD0 722 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 KATNB1Q9BVA0 655 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 C1QTNF6Q9BXI9 259 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 NDEL1Q9GZM8 345 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 SLC17A5Q9NRA2 495 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 GLTPQ9NZD2 209 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 ZNF346Q9UL40 294 aaKnown RBP12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 SIGLEC7Q9Y286 467 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 ADAM18Q9Y3Q7 739 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 FAM221AA4D161 298 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 PTP4A3O75365 173 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 TRMUO75648 421 aaKnown RBP12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 NDUFB2O95178 105 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 HOXB6P17509 224 aaKnown RBP12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 FPR3P25089 353 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 ACVR1BP36896 505 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 IST1P53990 364 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 SH3BGRP55822 239 aaPredicted RBP12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 RPL27P61353 136 aaKnown RBP12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 MYBPC1Q00872 1141 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 TRIP10Q15642 601 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 TBRG1Q3YBR2 411 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 BEX5Q5H9J7 111 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 ANKRD16Q6P6B7 361 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 C17orf78Q8N4C9 275 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 NOXO1Q8NFA2 376 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 GNPDA2Q8TDQ7 276 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 PLPPR2Q96GM1 343 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 HS3ST6Q96QI5 342 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 TSPAN32Q96QS1 320 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 YY1AP1Q9H869 796 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 NGBQ9NPG2 151 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 CCM2LQ9NUG4 571 aaPredicted RBP12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 POFUT2Q9Y2G5 429 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 SLC25A15Q9Y619 301 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 ITPR2Q14571 2701 aa12.88□□□□□ -0.35
PCOLCE-201ENST00000223061 APCP25054 2843 aa12.87□□□□□ -0.35
PCOLCE-201ENST00000223061 NOTCH2Q04721 2471 aa12.87□□□□□ -0.35
PCOLCE-201ENST00000223061 NPIPB13A6NJU9 1138 aa12.87□□□□□ -0.35
PCOLCE-201ENST00000223061 NPIPB4C9JG80 1138 aa12.87□□□□□ -0.35
PCOLCE-201ENST00000223061 IGHMP01871 453 aa12.87□□□□□ -0.35
PCOLCE-201ENST00000223061 CD14P08571 375 aa12.87□□□□□ -0.35
PCOLCE-201ENST00000223061 QDPRP09417 244 aa12.87□□□□□ -0.35
PCOLCE-201ENST00000223061 ZNF83P51522 516 aa12.87□□□□□ -0.35
PCOLCE-201ENST00000223061 C1orf94Q6P1W5 598 aa12.87□□□□□ -0.35
PCOLCE-201ENST00000223061 SEZ6L2Q6UXD5 910 aa12.87□□□□□ -0.35
PCOLCE-201ENST00000223061 THSD4Q6ZMP0 1018 aa12.87□□□□□ -0.35
PCOLCE-201ENST00000223061 CDC20BQ86Y33 519 aa12.87□□□□□ -0.35
PCOLCE-201ENST00000223061 LINC00471Q8N535 108 aa12.87□□□□□ -0.35
PCOLCE-201ENST00000223061 AQP11Q8NBQ7 271 aa12.87□□□□□ -0.35
PCOLCE-201ENST00000223061 HDAC2Q92769 488 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms