RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 CST6Q15828 149 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 TREML2Q5T2D2 321 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ESPNLQ6ZVH7 1005 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ADGRG5Q8IZF4 528 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 SLC15A4Q8N697 577 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 TMEM204Q9BSN7 226 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 GLIS2Q9BZE0 524 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF395Q9H8N7 513 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 FAM53CQ9NYF3 392 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 CBLCQ9ULV8 474 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 LGALS8O00214 317 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 LMO2P25791 158 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 OR1E2P47887 323 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 IL10RAQ13651 578 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 TBC1D28Q2M2D7 210 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF574Q6ZN55 896 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 CTU1Q7Z7A3 348 aaKnown RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ADIPOR2Q86V24 386 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 DTWD1Q8N5C7 304 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 OR1M1Q8NGA1 313 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 CLEC4DQ8WXI8 215 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 C4orf36Q96KX1 117 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 CDCA4Q9BXL8 241 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 A0A1B0GUH1 482 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 KDM4FA0A1W2PPD8 638 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ANTXRLA6NF34 631 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 LEFTY2O00292 366 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 GHRHP01286 108 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF728P0DKX0 622 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 PRRT3Q5FWE3 981 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 SCAMP5Q8TAC9 235 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 CD99L2Q8TCZ2 262 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 GPR152Q8TDT2 470 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 MOCOSQ96EN8 888 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 SLC35E1Q96K37 410 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 DIMT1Q9UNQ2 313 aaKnown RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 M0QZQ0 153 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ACSM4P0C7M7 580 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 MDH2P40926 338 aaKnown RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 WASP42768 502 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 HIST1H3AP68431 136 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 OR2A2Q6IF42 318 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 STEAP1BQ6NZ63 245 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 MRPS24Q96EL2 167 aaKnown RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 CHST6Q9GZX3 395 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 SERTAD4Q9NUC0 356 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 THYN1Q9P016 225 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ADAMTS6Q9UKP5 1117 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 RAD1O60671 282 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 GPR75O95800 540 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 TFAP2AP05549 437 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 RPL17P18621 184 aaKnown RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 MRPS34P82930 218 aaKnown RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 SLC14A1Q13336 389 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 DTWD2Q8NBA8 298 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 CPNE4Q96A23 557 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 S1PR3Q99500 378 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 UBQLN3Q9H347 655 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF225Q9UK10 706 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 LSM5Q9Y4Y9 91 aaKnown RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ELOA3CA0A087WX78 387 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 TRAF3IP2O43734 574 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 CACNG3O60359 315 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 EIF4E2O60573 245 aaKnown RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ANKRD34CP0C6C1 535 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 SOX2P48431 317 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 POU3F4P49335 361 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 CCR9P51686 369 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 MAP4K2Q12851 820 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 PSAPL1Q6NUJ1 521 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 BPIFB2Q8N4F0 458 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ARRDC1Q8N5I2 433 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 SLC35G3Q8N808 338 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 OR2AE1Q8NHA4 323 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 UBALD1Q8TB05 177 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 RPL3LQ92901 407 aaKnown RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 IGSF21Q96ID5 467 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 PPT2Q9UMR5 302 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 UBR3Q6ZT12 1888 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ACOD1A6NK06 481 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 GABRR3A8MPY1 467 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 PGA3P0DJD8 388 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 CCKARP32238 428 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ETV5P41161 510 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 MMP15P51511 669 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 TRNP1Q6NT89 227 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 SFXN4Q6P4A7 337 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 CPOQ8IVL8 374 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ST8SIA4Q92187 359 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 GPR45Q9Y5Y3 372 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 TANC2Q9HCD6 1990 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 PMS2P1A4D2B8 440 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 IGLON5A6NGN9 336 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 CHEK1O14757 476 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 MPIG6BO95866 241 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 CD14P08571 375 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 RAB7AP51149 207 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 CYB5R2Q6BCY4 276 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 PLXDC2Q6UX71 529 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 RANBP10Q6VN20 620 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms