RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Tead1P30051 426 aaKnown RBP9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Rap2bP61226 183 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Crmp1P97427 572 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Kcnj8P97794 424 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 HpQ61646 347 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 EngQ63961 653 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Opn5Q6VZZ7 377 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 LdahQ8BVA5 326 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 CrebzfQ91ZR3 358 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gdpd1Q9CRY7 314 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 PtgesQ9JM51 153 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Dmrt1Q9QZ59 374 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Mia3Q8BI84 1930 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Lamb2Q61292 1799 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 PvrigA0A1B0GS01 234 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gm3685J3QPP2 205 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cox4i1P19783 169 aaKnown RBP9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Fmo1P50285 532 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Acod1P54987 488 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Milr1Q3TB92 246 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr331Q5NC44 324 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gpr89aQ8BS95 455 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ash2lQ91X20 623 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Clint1Q99KN9 631 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Park7Q99LX0 189 aaKnown RBP9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Elovl7Q9D2Y9 281 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr938Q9EQ93 315 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ino80eA0A0U1RP99 260 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Mamdc4A2AJA7 1228 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Hacd4A2AKM2 232 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gm20390E9PZF0 267 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr574F8VQ18 346 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Vmn1r58G3X9U3 310 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 TertO70372 1122 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 AhrP30561 848 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Oprd1P32300 372 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 RetP35546 1115 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Mbl2P41317 244 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 MybphP70402 483 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ikzf1Q03267 517 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Tmprss11cQ1JRP2 431 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Lkaaear1Q8BIG2 198 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Sp110Q8BVK9 445 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Plcz1Q8K4D7 647 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 RabifQ91X96 123 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Msantd3Q9CR78 275 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Actl11Q9D5V1 1207 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 CtszQ9WUU7 306 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Tmem200cJ3QK46 637 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Snrpd2P62317 118 aaKnown RBP9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Btg1P62325 171 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Hoxd1Q01822 328 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 CbfbQ08024 187 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Tmem231Q3U284 315 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 MeikinQ5F2C3 434 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Slc38a8Q5HZH7 432 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr406Q7TRX0 323 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Fbxo5Q7TSG3 421 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Adgrd1Q80T32 903 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Lcn10Q810Z1 182 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Csnk1a1Q8BK63 337 aaKnown RBP9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Akr7a2Q8CG76 367 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Atg5Q99J83 275 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Yif1bQ9CX30 311 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Rps19Q9CZX8 145 aaKnown RBP9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Prss52Q9D9M0 321 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Tomm20Q9DCC8 145 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Slc30a7Q9JKN1 378 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Bmp10Q9R229 421 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 D17h6s53eQ9Z1R4 293 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Dock5B2RY04 1868 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Irf2P23906 349 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 LhcgrP30730 700 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Pou3f3P31361 497 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gsc2P56916 198 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Esp1Q3LHH8 102 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Slc2a9Q3T9X0 538 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Slc17a4Q5NCM1 492 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Fpr-rs7Q71MR7 338 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Dnajc22Q8CHS2 339 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Chrm5Q920H4 532 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Slamf9Q9D780 285 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Stra6lQ9DBN1 621 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 4930402F06RikA2AUQ8 332 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gm8024L7N2E0 100 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Creg1O88668 220 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Hsd3b2P26149 373 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Rnf149Q3U2C5 394 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Trav8d-2Q5R1B6 112 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 St8sia4Q64692 359 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Vangl1Q80Z96 526 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Actbl2Q8BFZ3 376 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Synpo2lQ8BWB1 975 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Fate1Q8CEK7 99 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cbr3Q8K354 277 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Abhd14bQ8VCR7 210 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 SvbpQ99LQ4 66 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 C1galt1Q9JJ06 363 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Acss2Q9QXG4 701 aa9.53□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gm14295A2BG91 834 aa9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms