RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 NcmapQ99JS0 100 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Cmpk1Q9DBP5 196 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Mrps15Q9DC71 258 aaKnown RBP12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Slc7a11Q9WTR6 502 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Lbx2Q9WUN8 195 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr1493-ps1A0A140LHU2 316 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Fam83cA2ARK0 776 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 AgmatA2AS89 358 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Zbtb34A2ATY4 518 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Dsg2O55111 1122 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 ChrndP02716 520 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Bpifa2P07743 235 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Fgf17P63075 216 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Alg11Q3TZM9 492 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Lin28bQ45KJ6 247 aaKnown RBP12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Spin2cQ6NVE3 257 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Kansl1Q80TG1 1036 aaKnown RBP12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Fam221aQ8C790 301 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Hist1h2ahQ8CGP6 128 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Saysd1Q8K190 188 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Ppp1r14cQ8R4S0 164 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Mrgpra5Q91ZC7 304 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Stoml2Q99JB2 353 aaKnown RBP12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 BniplQ99JU7 328 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Zfp810Q99K45 461 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Dnttip1Q99LB0 328 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Prdm5Q9CXE0 599 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Cthrc1Q9D1D6 245 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Ppa1Q9D819 289 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Vmn1r48Q9EQ52 302 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Calm4Q9JM83 148 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Eif3gQ9Z1D1 320 aaKnown RBP12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Lrit3W8DXL4 681 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Greb1Q3UHK3 1954 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Vps13aQ5H8C4 3166 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Dock11A2AF47 2073 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Pom121l12A0A1B0GSJ4 278 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 C2cd6E9Q152 557 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr520E9Q518 316 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Vmn2r99H3BK37 856 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 H2-EaP01904 255 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 P04224 255 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 H2-Q9P14431 200 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 PpibP24369 216 aaKnown RBP12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Mep1aP28825 747 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Ier3P46694 153 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Acta2P62737 377 aaKnown RBP12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Actg2P63268 376 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 McptlQ00356 246 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Epha4Q03137 986 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Atf4Q06507 349 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Qsox2Q3TMX7 692 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 D11Wsu47eQ6PIX9 558 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Otop2Q80SX5 563 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Impad1Q80V26 356 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Slitrk2Q810C0 846 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 LipkQ8BM14 398 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Acaa2Q8BWT1 397 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Rfwd3Q8CIK8 774 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Mill2Q8HWE5 355 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Hdac8Q8VH37 377 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Dennd6bQ9D9V7 585 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Klhl1Q9JI74 751 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Slc15a1Q9JIP7 709 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Mrpl39Q9JKF7 336 aa12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Coro1bQ9WUM3 484 aaKnown RBP12.32□□□□□ -0.44
Nup88-201ENSMUST00000035283 Unc13cQ8K0T7 2210 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 BC025446A0A087WQT1 134 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr115B2RTB9 312 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Pcdh17E9PXF0 1157 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Fbxw24E9PXM9 466 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Cdh19E9Q3A7 770 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Slc16a5G5E8K6 468 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Zmat3O54836 290 aaKnown RBP12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Hoxb3P09026 433 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 PnpP23492 289 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 TtlP38585 377 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 HfeP70387 359 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 S100gP97816 79 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Serpina3mQ03734 418 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 UradQ283N4 178 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Rnf166Q3U9F6 237 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Gcnt7Q3V3K7 433 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Zfp791Q497V9 528 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Ctf1Q60753 203 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Frg2f1Q6P3A2 227 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Sez6Q7TSK2 991 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Ddhd2Q80Y98 699 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Timmdc1Q8BUY5 285 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 P2ry10bQ8BY68 352 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Fam25cQ8CF02 89 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Spef1Q99JL1 234 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Emc3Q99KI3 261 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Cdca3Q99M54 266 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Smim3Q99PE5 60 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Lypd6bQ9D7F2 191 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Ceacam18Q9D871 376 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Sh3bgrlQ9JJU8 114 aaKnown RBP12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Dapp1Q9QXT1 280 aa12.31□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr545Q9WU94 316 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms