RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 RAI1Q7Z5J4 1906 aaPredicted RBP23.38■■□□□ 1.33
VEGFA-231ENST00000640499 AKAP8O43823 692 aaKnown RBP23.38■■□□□ 1.33
VEGFA-231ENST00000640499 ITGA2P17301 1181 aa23.38■■□□□ 1.33
VEGFA-231ENST00000640499 LIMS1P48059 325 aa23.38■■□□□ 1.33
VEGFA-231ENST00000640499 ARF1P84077 181 aaKnown RBP23.38■■□□□ 1.33
VEGFA-231ENST00000640499 DNAL1Q4LDG9 190 aa23.38■■□□□ 1.33
VEGFA-231ENST00000640499 MTX3Q5HYI7 312 aa23.38■■□□□ 1.33
VEGFA-231ENST00000640499 ABHD12BQ7Z5M8 362 aaPredicted RBP23.38■■□□□ 1.33
VEGFA-231ENST00000640499 ZDHHC21Q8IVQ6 265 aa23.38■■□□□ 1.33
VEGFA-231ENST00000640499 OR13C2Q8NGS9 318 aa23.38■■□□□ 1.33
VEGFA-231ENST00000640499 TMEM54Q969K7 222 aa23.38■■□□□ 1.33
VEGFA-231ENST00000640499 GPA33Q99795 319 aa23.38■■□□□ 1.33
VEGFA-231ENST00000640499 CADM1Q9BY67 442 aaKnown RBP23.38■■□□□ 1.33
VEGFA-231ENST00000640499 TRAV27A0A087WT01 109 aa23.37■■□□□ 1.33
VEGFA-231ENST00000640499 ZNF726A6NNF4 738 aa23.37■■□□□ 1.33
VEGFA-231ENST00000640499 EFCAB9A8MZ26 197 aa23.37■■□□□ 1.33
VEGFA-231ENST00000640499 CLOCKO15516 846 aa23.37■■□□□ 1.33
VEGFA-231ENST00000640499 MAGEA2P43356 314 aa23.37■■□□□ 1.33
VEGFA-231ENST00000640499 TGFBR3Q03167 851 aa23.37■■□□□ 1.33
VEGFA-231ENST00000640499 CEACAM16Q2WEN9 425 aa23.37■■□□□ 1.33
VEGFA-231ENST00000640499 FGD3Q5JSP0 725 aa23.37■■□□□ 1.33
VEGFA-231ENST00000640499 ARMC4Q5T2S8 1044 aa23.37■■□□□ 1.33
VEGFA-231ENST00000640499 HMBOX1Q6NT76 420 aa23.37■■□□□ 1.33
VEGFA-231ENST00000640499 CDH24Q86UP0 819 aa23.37■■□□□ 1.33
VEGFA-231ENST00000640499 GPR137CQ8N3F9 429 aa23.37■■□□□ 1.33
VEGFA-231ENST00000640499 C17orf78Q8N4C9 275 aa23.37■■□□□ 1.33
VEGFA-231ENST00000640499 OR51A7Q8NH64 312 aa23.37■■□□□ 1.33
VEGFA-231ENST00000640499 LILRB1Q8NHL6 650 aaPredicted RBP23.37■■□□□ 1.33
VEGFA-231ENST00000640499 MCUR1Q96AQ8 359 aa23.37■■□□□ 1.33
VEGFA-231ENST00000640499 MUCL1Q96DR8 90 aa23.37■■□□□ 1.33
VEGFA-231ENST00000640499 INIPQ9NRY2 104 aa23.37■■□□□ 1.33
VEGFA-231ENST00000640499 SH3PXD2BA1X283 911 aa23.36■■□□□ 1.33
VEGFA-231ENST00000640499 GSC2O15499 205 aa23.36■■□□□ 1.33
VEGFA-231ENST00000640499 TRAP1Q12931 704 aaKnown RBP23.36■■□□□ 1.33
VEGFA-231ENST00000640499 ACKR1Q16570 336 aa23.36■■□□□ 1.33
VEGFA-231ENST00000640499 TBRG1Q3YBR2 411 aa23.36■■□□□ 1.33
VEGFA-231ENST00000640499 LRFN4Q6PJG9 635 aa23.36■■□□□ 1.33
VEGFA-231ENST00000640499 OR4K5Q8NGD3 323 aa23.36■■□□□ 1.33
VEGFA-231ENST00000640499 ASB10Q8WXI3 467 aa23.36■■□□□ 1.33
VEGFA-231ENST00000640499 SLC25A44Q96H78 314 aaPredicted RBP23.36■■□□□ 1.33
VEGFA-231ENST00000640499 FAM46AQ96IP4 442 aaKnown RBP23.36■■□□□ 1.33
VEGFA-231ENST00000640499 ADAD1Q96M93 576 aaKnown RBP23.36■■□□□ 1.33
VEGFA-231ENST00000640499 C1QTNF6Q9BXI9 259 aa23.36■■□□□ 1.33
VEGFA-231ENST00000640499 MRPL13Q9BYD1 178 aaKnown RBP23.36■■□□□ 1.33
VEGFA-231ENST00000640499 OTOGQ6ZRI0 2925 aa23.36■■□□□ 1.33
VEGFA-231ENST00000640499 A0A096LPE4 126 aa23.35■■□□□ 1.33
VEGFA-231ENST00000640499 A0A1W2PPZ6 126 aa23.35■■□□□ 1.33
VEGFA-231ENST00000640499 PTP4A3O75365 173 aa23.35■■□□□ 1.33
VEGFA-231ENST00000640499 DNAJC8O75937 253 aaPredicted RBP23.35■■□□□ 1.33
VEGFA-231ENST00000640499 BCL10O95999 233 aa23.35■■□□□ 1.33
VEGFA-231ENST00000640499 PGA4P0DJD7 388 aa23.35■■□□□ 1.33
VEGFA-231ENST00000640499 PGA3P0DJD8 388 aa23.35■■□□□ 1.33
VEGFA-231ENST00000640499 SAGP10523 405 aaPredicted RBP23.35■■□□□ 1.33
VEGFA-231ENST00000640499 RRM2P31350 389 aa23.35■■□□□ 1.33
VEGFA-231ENST00000640499 SPIBQ01892 262 aa23.35■■□□□ 1.33
VEGFA-231ENST00000640499 BSPH1Q075Z2 132 aa23.35■■□□□ 1.33
VEGFA-231ENST00000640499 HIST3H3Q16695 136 aa23.35■■□□□ 1.33
VEGFA-231ENST00000640499 OAFQ86UD1 273 aa23.35■■□□□ 1.33
VEGFA-231ENST00000640499 IGFN1Q86VF2 1251 aa23.35■■□□□ 1.33
VEGFA-231ENST00000640499 MAGIXQ9H6Y5 334 aa23.35■■□□□ 1.33
VEGFA-231ENST00000640499 ST6GALNAC2Q9UJ37 374 aa23.35■■□□□ 1.33
VEGFA-231ENST00000640499 ZNF503-AS2A6NEH8 195 aa23.34■■□□□ 1.33
VEGFA-231ENST00000640499 GADD45GO95257 159 aa23.34■■□□□ 1.33
VEGFA-231ENST00000640499 HMGA2P52926 109 aa23.34■■□□□ 1.33
VEGFA-231ENST00000640499 NR1H2P55055 460 aa23.34■■□□□ 1.33
VEGFA-231ENST00000640499 FXYD6P3P58550 94 aa23.34■■□□□ 1.33
VEGFA-231ENST00000640499 ALG10Q5BKT4 473 aa23.34■■□□□ 1.33
VEGFA-231ENST00000640499 ANKRD16Q6P6B7 361 aa23.34■■□□□ 1.33
VEGFA-231ENST00000640499 ZNF704Q6ZNC4 412 aaPredicted RBP23.34■■□□□ 1.33
VEGFA-231ENST00000640499 ZER1Q7Z7L7 766 aa23.34■■□□□ 1.33
VEGFA-231ENST00000640499 ZNF347Q96SE7 839 aa23.34■■□□□ 1.33
VEGFA-231ENST00000640499 GLTPQ9NZD2 209 aa23.34■■□□□ 1.33
VEGFA-231ENST00000640499 CCDC168Q8NDH2 2452 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 A0A1W2PRG6 482 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 TRMUO75648 421 aaKnown RBP23.33■■□□□ 1.33
VEGFA-231ENST00000640499 CSNK1A1P48729 337 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 SLC9A3P48764 834 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 ZNF83P51522 516 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 TUBA1BP68363 451 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 TUBA4AP68366 448 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 PAMR1Q6UXH9 720 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 TUBA1AQ71U36 451 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 RRM2BQ7LG56 351 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 ADGRG5Q8IZF4 528 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 CDK20Q8IZL9 346 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 OR6N1Q8NGY5 312 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 MAGEE2Q8TD90 523 aaPredicted RBP23.33■■□□□ 1.33
VEGFA-231ENST00000640499 NEUROG1Q92886 237 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 ZNF566Q969W8 418 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 ALPK1Q96QP1 1244 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 TXNIPQ9H3M7 391 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 VNN3Q9NY84 501 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 PLEKHA6Q9Y2H5 1048 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 AMDHD2Q9Y303 409 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 MYO9AB2RTY4 2548 aa23.33■■□□□ 1.33
VEGFA-231ENST00000640499 NPIPB13A6NJU9 1138 aa23.32■■□□□ 1.32
VEGFA-231ENST00000640499 ZNF99A8MXY4 864 aaPredicted RBP23.32■■□□□ 1.32
VEGFA-231ENST00000640499 NPIPB4C9JG80 1138 aa23.32■■□□□ 1.32
VEGFA-231ENST00000640499 SEC14L2O76054 403 aa23.32■■□□□ 1.32
VEGFA-231ENST00000640499 ATE1O95260 518 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms