RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 ACTR6Q9GZN1 396 aa10.99□□□□□ -0.65
CLN8-212ENST00000637083 SLA2Q9H6Q3 261 aa10.99□□□□□ -0.65
CLN8-212ENST00000637083 NIPAL2Q9H841 368 aa10.99□□□□□ -0.65
CLN8-212ENST00000637083 MRM2Q9UI43 246 aaKnown RBP10.99□□□□□ -0.65
CLN8-212ENST00000637083 MRPS7Q9Y2R9 242 aaKnown RBP10.99□□□□□ -0.65
CLN8-212ENST00000637083 RBMX2Q9Y388 322 aaKnown RBP10.99□□□□□ -0.65
CLN8-212ENST00000637083 ETV7Q9Y603 341 aa10.99□□□□□ -0.65
CLN8-212ENST00000637083 SEC16AO15027 2179 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 A8MV72 311 aaPredicted RBP10.98□□□□□ -0.65
CLN8-212ENST00000637083 KHNYNO15037 678 aaKnown RBP10.98□□□□□ -0.65
CLN8-212ENST00000637083 UPK3AO75631 287 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 RPP14O95059 124 aaKnown RBP10.98□□□□□ -0.65
CLN8-212ENST00000637083 ANKRD34CP0C6C1 535 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 GSTT2P0CG29 244 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 GSTT2BP0CG30 244 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 ALOX5APP20292 161 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 GRPRP30550 384 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 SUMO3P55854 103 aaPredicted RBP10.98□□□□□ -0.65
CLN8-212ENST00000637083 RAG2P55895 527 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 AP3S2P59780 193 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 NANOS3P60323 173 aaKnown RBP10.98□□□□□ -0.65
CLN8-212ENST00000637083 RPL27P61353 136 aaKnown RBP10.98□□□□□ -0.65
CLN8-212ENST00000637083 RNF4P78317 190 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 MAB21L1Q13394 359 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 SF3B4Q15427 424 aaKnown RBP eCLIP10.98□□□□□ -0.65
CLN8-212ENST00000637083 CCDC92Q53HC0 331 aaPredicted RBP10.98□□□□□ -0.65
CLN8-212ENST00000637083 C1orf140Q5VVS0 124 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 ZNF433Q8N7K0 673 aaPredicted RBP10.98□□□□□ -0.65
CLN8-212ENST00000637083 ASCC1Q8N9N2 400 aaKnown RBP10.98□□□□□ -0.65
CLN8-212ENST00000637083 LGALS14Q8TCE9 139 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 GPR119Q8TDV5 335 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 ST8SIA1Q92185 356 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 NSMAFQ92636 917 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 YIPF5Q969M3 257 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 SLC25A36Q96CQ1 311 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 S100A16Q96FQ6 103 aaKnown RBP10.98□□□□□ -0.65
CLN8-212ENST00000637083 ZFP3Q96NJ6 502 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 IER2Q9BTL4 223 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 SYT4Q9H2B2 425 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 TXNIPQ9H3M7 391 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 TAS2R5Q9NYW4 299 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 STMN3Q9NZ72 180 aa10.98□□□□□ -0.65
CLN8-212ENST00000637083 PCDHGA9Q9Y5G4 932 aaKnown RBP10.98□□□□□ -0.65
CLN8-212ENST00000637083 IGLV3-12A0A075B6K2 115 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 TRBV5-5A0A0J9YX44 114 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 ACOD1A6NK06 481 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 LANCL1O43813 399 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 SCO2O43819 266 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 NPIPB7O75200 414 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 DXOO77932 396 aaKnown RBP10.97□□□□□ -0.65
CLN8-212ENST00000637083 HEXBP07686 556 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 IFITM2Q01629 132 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 C17orf67Q0P5P2 114 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 KCTD18Q6PI47 426 aaPredicted RBP10.97□□□□□ -0.65
CLN8-212ENST00000637083 POMZP3Q6PJE2 187 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 LYPD4Q6UWN0 246 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 OTOSQ8NHW6 89 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 NUBPLQ8TB37 319 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 STT3BQ8TCJ2 826 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 GPR148Q8TDV2 347 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 THEM6Q8WUY1 208 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 SMIM4Q8WVI0 70 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 CCDC74AQ96AQ1 378 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 SEMA4CQ9C0C4 833 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 CLEC4AQ9UMR7 237 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 HEATR5AQ86XA9 2040 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 SPAG17Q6Q759 2223 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 PRSS37A4D1T9 235 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 NAP1L6A6NFF2 107 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 TVP23AA6NH52 213 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 C11orf98E9PRG8 122 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 PSMD9O00233 223 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 PIN1P1O15428 100 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 GMFGO60234 142 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 ZNF254O75437 659 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 ABHD16AO95870 558 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 IGHMP01871 453 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 HLA-DQA2P01906 255 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 C1QBP02746 253 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 GIMD1P0DJR0 217 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 NAGAP17050 411 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 CRABP1P29762 137 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 TOMM34Q15785 309 aaPredicted RBP10.97□□□□□ -0.65
CLN8-212ENST00000637083 SLC36A2Q495M3 483 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 DPY19L4Q7Z388 723 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 SYT9Q86SS6 491 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 ADGRG3Q86Y34 549 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 PLCZ1Q86YW0 608 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 PM20D2Q8IYS1 436 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 ZNF676Q8N7Q3 588 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 OR5L2Q8NGL0 311 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 MAP6Q96JE9 813 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 DCBLD2Q96PD2 775 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 FYTTD1Q96QD9 318 aaKnown RBP10.97□□□□□ -0.65
CLN8-212ENST00000637083 RTN4RQ9BZR6 473 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 MRPL39Q9NYK5 338 aaKnown RBP10.97□□□□□ -0.65
CLN8-212ENST00000637083 VSX1Q9NZR4 365 aaPredicted RBP10.97□□□□□ -0.65
CLN8-212ENST00000637083 FRRS1LQ9P0K9 344 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 B9D1Q9UPM9 204 aa10.97□□□□□ -0.65
CLN8-212ENST00000637083 CABIN1Q9Y6J0 2220 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms