RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 OPN5Q6U736 354 aa19.89■□□□□ 0.77
PNKP-220ENST00000627232 TRILQ7L0X0 811 aa19.89■□□□□ 0.77
PNKP-220ENST00000627232 ZNF554Q86TJ5 538 aa19.89■□□□□ 0.77
PNKP-220ENST00000627232 GDPD1Q8N9F7 314 aa19.89■□□□□ 0.77
PNKP-220ENST00000627232 ZNF248Q8NDW4 579 aa19.89■□□□□ 0.77
PNKP-220ENST00000627232 OR2M3Q8NG83 312 aa19.89■□□□□ 0.77
PNKP-220ENST00000627232 TTYH2Q9BSA4 534 aa19.89■□□□□ 0.77
PNKP-220ENST00000627232 STRADBQ9C0K7 418 aa19.89■□□□□ 0.77
PNKP-220ENST00000627232 WDR76Q9H967 626 aa19.89■□□□□ 0.77
PNKP-220ENST00000627232 POLE4Q9NR33 117 aa19.89■□□□□ 0.77
PNKP-220ENST00000627232 COMMD3Q9UBI1 195 aa19.89■□□□□ 0.77
PNKP-220ENST00000627232 VDAC3Q9Y277 283 aa19.89■□□□□ 0.77
PNKP-220ENST00000627232 LNP1A1A4G5 178 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 HSPB2A8KAH6 182 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 SLC19A2O60779 497 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 ITGA10O75578 1167 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 AVPR2P30518 371 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 HSPB2Q16082 182 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 ZMAT1Q5H9K5 638 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 UNQ9370/PRO34162Q6UXP9 181 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 FAM220AQ7Z4H9 259 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 DND1Q8IYX4 353 aaKnown RBP19.88■□□□□ 0.77
PNKP-220ENST00000627232 OR8H2Q8N162 312 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 NLGN4YQ8NFZ3 816 aaPredicted RBP19.88■□□□□ 0.77
PNKP-220ENST00000627232 DNAJA3Q96EY1 480 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 FRMD6Q96NE9 622 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 INTS14Q96SY0 518 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 NPAS1Q99742 590 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 MFRPQ9BY79 579 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 PPIL3Q9H2H8 161 aaKnown RBP19.88■□□□□ 0.77
PNKP-220ENST00000627232 B9D1Q9UPM9 204 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 LOXL2Q9Y4K0 774 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 HRH3Q9Y5N1 445 aa19.88■□□□□ 0.77
PNKP-220ENST00000627232 ZDBF2Q9HCK1 2354 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 TEX51A0A1B0GUA7 166 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 A6NIZ1 184 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 FAM47E-STBD1D6RA91 191 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 ARL6IP5O75915 188 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 PLGP00747 810 aaPredicted RBP19.87■□□□□ 0.77
PNKP-220ENST00000627232 RAP1BP61224 184 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 RAP1AP62834 184 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 EGR3Q06889 387 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 PUDPQ08623 228 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 AGAP7PQ5VUJ5 663 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 H1FNTQ75WM6 255 aaPredicted RBP19.87■□□□□ 0.77
PNKP-220ENST00000627232 NDUFAF7Q7L592 441 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 FADS6Q8N9I5 356 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 NXPE2Q96DL1 559 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 SOSTQ9BQB4 213 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 CHST11Q9NPF2 352 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 SERINC1Q9NRX5 453 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 RHBDL2Q9NX52 303 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 CHCHD2Q9Y6H1 151 aaPredicted RBP19.87■□□□□ 0.77
PNKP-220ENST00000627232 RALGAPA1Q6GYQ0 2036 aa19.87■□□□□ 0.77
PNKP-220ENST00000627232 MS4A18H0YCH9 400 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 UCHL1P09936 223 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 PSMB10P40306 273 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 RPS11P62280 158 aaKnown RBP eCLIP19.86■□□□□ 0.77
PNKP-220ENST00000627232 OR7A5Q15622 319 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 KIF26BQ2KJY2 2108 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 MS4A18Q3C1V0 323 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 FAM205BPQ63HN1 556 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 NR2C2APQ86WQ0 139 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 OR11G2Q8NGC1 345 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 POC1BQ8TC44 478 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 ARL5BQ96KC2 179 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 FANCFQ9NPI8 374 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 ALKBH4Q9NXW9 302 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 LAMP5Q9UJQ1 280 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 KLHDC2Q9Y2U9 406 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 SLC22A23A1A5C7 686 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 TVP23AA6NH52 213 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 LIPT2A6NK58 231 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 PRR32B1ATL7 298 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 HPGDSO60760 199 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 STK17BO94768 372 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 AKR7A3O95154 331 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 APOA1P02647 267 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 KRT8P05787 483 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 ALOX5APP20292 161 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 EVX1P49640 407 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 INSM1Q01101 510 aaPredicted RBP19.86■□□□□ 0.77
PNKP-220ENST00000627232 FAM27D1Q5T7N8 215 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 ARMC10Q8N2F6 343 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 OR6N2Q8NGY6 317 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 SNRNP27Q8WVK2 155 aaKnown RBP19.86■□□□□ 0.77
PNKP-220ENST00000627232 CCDC86Q9H6F5 360 aaKnown RBP19.86■□□□□ 0.77
PNKP-220ENST00000627232 C14orf119Q9NWQ9 140 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 MRM2Q9UI43 246 aaKnown RBP19.86■□□□□ 0.77
PNKP-220ENST00000627232 ZNF281Q9Y2X9 895 aa19.86■□□□□ 0.77
PNKP-220ENST00000627232 NSG1A0A0A6YYJ2 146 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 IGLV1-36A0A0B4J1U3 117 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 A0A0G2JK05 382 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 EFNA2O43921 213 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 UPK3AO75631 287 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 ABHD16AO95870 558 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 CELA2AP08217 269 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 TFPIP10646 304 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 IMPDH2P12268 514 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 FKBP2P26885 142 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms