RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 RAD51DO75771 328 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 IGHMP01871 453 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 PGA4P0DJD7 388 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 PGA3P0DJD8 388 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 EPXP11678 715 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 GSSP48637 474 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 ANKDD1AQ495B1 522 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 C9orf135Q5VTT2 229 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 CARD17Q5XLA6 110 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 THSD4Q6ZMP0 1018 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 C20orf196Q8IYI0 205 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 CDK20Q8IZL9 346 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 ASB10Q8WXI3 467 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 MRPL13Q9BYD1 178 aaKnown RBP12.59□□□□□ -0.39
CBWD3-217ENST00000621474 REEP1Q9H902 201 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 NTN4Q9HB63 628 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 UPB1Q9UBR1 384 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 APCP25054 2843 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 FAM221AA4D161 298 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 OR6C65A6NJZ3 312 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 CYSRT1A8MQ03 144 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 RPL36A-HNRNPH2H7BZ11 118 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 SLC43A1O75387 559 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 GASTP01350 101 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 HOXB6P17509 224 aaKnown RBP12.58□□□□□ -0.4
CBWD3-217ENST00000621474 FPR3P25089 353 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 MPGP29372 298 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 ACTR3P61158 418 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 GABRA6Q16445 453 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 HIST3H3Q16695 136 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 MICAQ29983 383 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 BHLHA15Q7RTS1 189 aaPredicted RBP12.58□□□□□ -0.4
CBWD3-217ENST00000621474 FAM122BQ7Z309 247 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 RSRC1Q96IZ7 334 aaKnown RBP12.58□□□□□ -0.4
CBWD3-217ENST00000621474 LRR1Q96L50 414 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 ADAD1Q96M93 576 aaKnown RBP12.58□□□□□ -0.4
CBWD3-217ENST00000621474 MUS81Q96NY9 551 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 TSPAN32Q96QS1 320 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 HDHD5Q9BXW7 423 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 TXNIPQ9H3M7 391 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 NELFAQ9H3P2 528 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 IL20RAQ9UHF4 553 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 TMCC3Q9ULS5 477 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 ADAM18Q9Y3Q7 739 aa12.58□□□□□ -0.4
CBWD3-217ENST00000621474 A0A1W2PRG6 482 aa12.57□□□□□ -0.4
CBWD3-217ENST00000621474 AKAP8O43823 692 aaKnown RBP12.57□□□□□ -0.4
CBWD3-217ENST00000621474 TIPRLO75663 272 aa12.57□□□□□ -0.4
CBWD3-217ENST00000621474 BCL10O95999 233 aa12.57□□□□□ -0.4
CBWD3-217ENST00000621474 CTXN1P60606 82 aa12.57□□□□□ -0.4
CBWD3-217ENST00000621474 PRPS1P60891 318 aa12.57□□□□□ -0.4
CBWD3-217ENST00000621474 ROR2Q01974 943 aaKnown RBP12.57□□□□□ -0.4
CBWD3-217ENST00000621474 GABPB1Q06547 395 aaPredicted RBP12.57□□□□□ -0.4
CBWD3-217ENST00000621474 TAB1Q15750 504 aa12.57□□□□□ -0.4
CBWD3-217ENST00000621474 HS3ST5Q8IZT8 346 aa12.57□□□□□ -0.4
CBWD3-217ENST00000621474 STEAP2Q8NFT2 490 aa12.57□□□□□ -0.4
CBWD3-217ENST00000621474 ZNF519Q8TB69 540 aa12.57□□□□□ -0.4
CBWD3-217ENST00000621474 FAM222BQ8WU58 562 aa12.57□□□□□ -0.4
CBWD3-217ENST00000621474 TMEM54Q969K7 222 aa12.57□□□□□ -0.4
CBWD3-217ENST00000621474 C14orf79Q96F83 325 aa12.57□□□□□ -0.4
CBWD3-217ENST00000621474 SLC25A44Q96H78 314 aaPredicted RBP12.57□□□□□ -0.4
CBWD3-217ENST00000621474 ZC3HAV1LQ96H79 300 aaKnown RBP12.57□□□□□ -0.4
CBWD3-217ENST00000621474 BOD1Q96IK1 185 aa12.57□□□□□ -0.4
CBWD3-217ENST00000621474 GPX7Q96SL4 187 aaPredicted RBP12.57□□□□□ -0.4
CBWD3-217ENST00000621474 MED18Q9BUE0 208 aa12.57□□□□□ -0.4
CBWD3-217ENST00000621474 CRLF2Q9HC73 371 aa12.57□□□□□ -0.4
CBWD3-217ENST00000621474 GPR35Q9HC97 309 aa12.57□□□□□ -0.4
CBWD3-217ENST00000621474 KRCC1Q9NPI7 259 aaPredicted RBP12.57□□□□□ -0.4
CBWD3-217ENST00000621474 ARMC1Q9NVT9 282 aa12.57□□□□□ -0.4
CBWD3-217ENST00000621474 ROS1P08922 2347 aa12.56□□□□□ -0.4
CBWD3-217ENST00000621474 AKAP6Q13023 2319 aa12.56□□□□□ -0.4
CBWD3-217ENST00000621474 UNC119BA6NIH7 251 aa12.56□□□□□ -0.4
CBWD3-217ENST00000621474 DEFB108AA8MXU0 73 aa12.56□□□□□ -0.4
CBWD3-217ENST00000621474 ZNF587BE7ETH6 402 aa12.56□□□□□ -0.4
CBWD3-217ENST00000621474 M0R3G1 203 aa12.56□□□□□ -0.4
CBWD3-217ENST00000621474 CCNB2O95067 398 aa12.56□□□□□ -0.4
CBWD3-217ENST00000621474 PPP3CBP16298 524 aa12.56□□□□□ -0.4
CBWD3-217ENST00000621474 IL32P24001 234 aa12.56□□□□□ -0.4
CBWD3-217ENST00000621474 TSPAN31Q12999 210 aa12.56□□□□□ -0.4
CBWD3-217ENST00000621474 KPNB1Q14974 876 aaKnown RBP12.56□□□□□ -0.4
CBWD3-217ENST00000621474 DAZAP2Q15038 168 aaPredicted RBP12.56□□□□□ -0.4
CBWD3-217ENST00000621474 CLDN22Q8N7P3 220 aa12.56□□□□□ -0.4
CBWD3-217ENST00000621474 HDAC2Q92769 488 aaKnown RBP12.56□□□□□ -0.4
CBWD3-217ENST00000621474 ZNF566Q969W8 418 aa12.56□□□□□ -0.4
CBWD3-217ENST00000621474 NMD3Q96D46 503 aaKnown RBP12.56□□□□□ -0.4
CBWD3-217ENST00000621474 NIPSNAP1Q9BPW8 284 aa12.56□□□□□ -0.4
CBWD3-217ENST00000621474 KATNB1Q9BVA0 655 aa12.56□□□□□ -0.4
CBWD3-217ENST00000621474 SLC24A3Q9HC58 644 aa12.56□□□□□ -0.4
CBWD3-217ENST00000621474 NRIP3Q9NQ35 241 aa12.56□□□□□ -0.4
CBWD3-217ENST00000621474 NDRG3Q9UGV2 375 aa12.56□□□□□ -0.4
CBWD3-217ENST00000621474 ZNF346Q9UL40 294 aaKnown RBP12.56□□□□□ -0.4
CBWD3-217ENST00000621474 A0A1W2PPR1 153 aa12.55□□□□□ -0.4
CBWD3-217ENST00000621474 OR5H1A6NKK0 313 aa12.55□□□□□ -0.4
CBWD3-217ENST00000621474 ZNF726A6NNF4 738 aa12.55□□□□□ -0.4
CBWD3-217ENST00000621474 TRMUO75648 421 aaKnown RBP12.55□□□□□ -0.4
CBWD3-217ENST00000621474 CIB2O75838 187 aa12.55□□□□□ -0.4
CBWD3-217ENST00000621474 NDUFB2O95178 105 aa12.55□□□□□ -0.4
CBWD3-217ENST00000621474 TP53P04637 393 aaPredicted RBP12.55□□□□□ -0.4
CBWD3-217ENST00000621474 CRYGSP22914 178 aa12.55□□□□□ -0.4
CBWD3-217ENST00000621474 LOXP28300 417 aaPredicted RBP12.55□□□□□ -0.4
CBWD3-217ENST00000621474 DAP3P51398 398 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms