RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 H7C1C5 153 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 GPR171O14626 319 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 UPK3AO75631 287 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 NDUFB2O95178 105 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 CRHP06850 196 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 OPRM1P35372 400 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 RPL4P36578 427 aaKnown RBP12.06□□□□□ -0.48
NEK3-210ENST00000620675 POLR2IP36954 125 aaKnown RBP12.06□□□□□ -0.48
NEK3-210ENST00000620675 LCN6P62502 163 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 PPP2R2BQ00005 443 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 SNTB1Q13884 538 aaKnown RBP12.06□□□□□ -0.48
NEK3-210ENST00000620675 GK3PQ14409 553 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 TSC22D1Q15714 1073 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 RFX4Q33E94 735 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 ARMC4Q5T2S8 1044 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 KDM4DQ6B0I6 523 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 RASSF6Q6ZTQ3 369 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 TMEM123Q8N131 208 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 LILRB4Q8NHJ6 448 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 ASB10Q8WXI3 467 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 ZNF837Q96EG3 531 aaPredicted RBP12.06□□□□□ -0.48
NEK3-210ENST00000620675 GABARAPL1Q9H0R8 117 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 GP6Q9HCN6 339 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 PLSCR4Q9NRQ2 329 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 SLC7A10Q9NS82 523 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 COQ3Q9NZJ6 369 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 CDH10Q9Y6N8 788 aa12.06□□□□□ -0.48
NEK3-210ENST00000620675 BAHCC1Q9P281 2608 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 MRPL33O75394 65 aaKnown RBP12.05□□□□□ -0.48
NEK3-210ENST00000620675 IL18BPO95998 194 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 ANXA8P13928 327 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 PEX2P28328 305 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 OR3A2P47893 321 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 ARHGDIAP52565 204 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 PRPS1P60891 318 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 TMEM236Q5W0B7 351 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 CD300LDQ6UXZ3 194 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 SVOPLQ8N434 492 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 SYT14Q8NB59 555 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 OR4Q3Q8NH05 313 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 CA5BP1Q8WTZ4 195 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 TMEM45BQ96B21 275 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 ALKBH3Q96Q83 286 aaPredicted RBP12.05□□□□□ -0.48
NEK3-210ENST00000620675 OSBPL10Q9BXB5 764 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 POLDIP3Q9BY77 421 aaKnown RBP12.05□□□□□ -0.48
NEK3-210ENST00000620675 TXNIPQ9H3M7 391 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 NRIP3Q9NQ35 241 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 IL20Q9NYY1 176 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 KIF17Q9P2E2 1029 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 PROCRQ9UNN8 238 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 IER3IP1Q9Y5U9 82 aa12.05□□□□□ -0.48
NEK3-210ENST00000620675 A8MXE2 369 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 DVL2O14641 736 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 CD14P08571 375 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 POU1F1P28069 291 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 SMSP52788 366 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 MYBPC1Q00872 1141 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 MESTQ5EB52 335 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 SLC35F1Q5T1Q4 408 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 C9orf135Q5VTT2 229 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 PTCHD4Q6ZW05 846 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 ZNF100Q8IYN0 542 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 ZNF519Q8TB69 540 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 HDAC2Q92769 488 aaKnown RBP12.04□□□□□ -0.48
NEK3-210ENST00000620675 JKAMPQ9P055 326 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 STX18Q9P2W9 335 aaKnown RBP12.04□□□□□ -0.48
NEK3-210ENST00000620675 IGKV1D-43A0A0B4J1Z2 117 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 TEX13CA0A0J9YWL9 993 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 A0A1W2PRG6 482 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 C19orf84I3L1E1 186 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 BHLHE40O14503 412 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 MGRN1O60291 552 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 BCL10O95999 233 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 ALPLP05186 524 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 RPL27P61353 136 aaKnown RBP12.04□□□□□ -0.48
NEK3-210ENST00000620675 TFF3Q07654 80 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 TRIP10Q15642 601 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 MTFR2Q6P444 385 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 FAM26EQ8N5C1 309 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 MAGEE2Q8TD90 523 aaPredicted RBP12.04□□□□□ -0.48
NEK3-210ENST00000620675 NRG4Q8WWG1 115 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 HTRA1Q92743 480 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 APH1AQ96BI3 265 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 GPX7Q96SL4 187 aaPredicted RBP12.04□□□□□ -0.48
NEK3-210ENST00000620675 IFT27Q9BW83 186 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 TSSK6Q9BXA6 273 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 DCLRE1BQ9H816 532 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 TBC1D23Q9NUY8 699 aa12.04□□□□□ -0.48
NEK3-210ENST00000620675 H3BN98 237 aa12.03□□□□□ -0.48
NEK3-210ENST00000620675 TRMUO75648 421 aaKnown RBP12.03□□□□□ -0.48
NEK3-210ENST00000620675 SLC2A10O95528 541 aa12.03□□□□□ -0.48
NEK3-210ENST00000620675 IGHMP01871 453 aa12.03□□□□□ -0.48
NEK3-210ENST00000620675 PGA4P0DJD7 388 aa12.03□□□□□ -0.48
NEK3-210ENST00000620675 PGA3P0DJD8 388 aa12.03□□□□□ -0.48
NEK3-210ENST00000620675 CD8BP10966 210 aa12.03□□□□□ -0.48
NEK3-210ENST00000620675 ACVR1BP36896 505 aa12.03□□□□□ -0.48
NEK3-210ENST00000620675 FMODQ06828 376 aa12.03□□□□□ -0.48
NEK3-210ENST00000620675 FAM27E3Q08E93 113 aa12.03□□□□□ -0.48
NEK3-210ENST00000620675 FAPQ12884 760 aa12.03□□□□□ -0.48
NEK3-210ENST00000620675 DAG1Q14118 895 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms