RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 MTCH2Q9Y6C9 303 aa2.4□□□□□ -2.03
MALAT1-216ENST00000620465 DDX49Q9Y6V7 483 aaKnown RBP2.4□□□□□ -2.03
MALAT1-216ENST00000620465 FAM186AA6NE01 2351 aa2.4□□□□□ -2.03
MALAT1-216ENST00000620465 PTPRSQ13332 1948 aa2.4□□□□□ -2.03
MALAT1-216ENST00000620465 KIAA1671Q9BY89 1806 aa2.4□□□□□ -2.03
MALAT1-216ENST00000620465 CENPFP49454 3210 aa2.4□□□□□ -2.03
MALAT1-216ENST00000620465 F5P12259 2224 aa2.4□□□□□ -2.03
MALAT1-216ENST00000620465 SPAG17Q6Q759 2223 aa2.4□□□□□ -2.03
MALAT1-216ENST00000620465 CACNA1HO95180 2353 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 PLXNA4Q9HCM2 1894 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 COL4A6Q14031 1691 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 WI2-2373I1.2A0A1W2PRP0 233 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 ABCD4O14678 606 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 ZNF861PO60384 105 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 N4BP1O75113 896 aaKnown RBP2.39□□□□□ -2.03
MALAT1-216ENST00000620465 GUCA1CO95843 209 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 CCNE2O96020 404 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 HPNP05981 417 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 ATP6V1C1P21283 382 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 PAX7P23759 505 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 U2AF2P26368 475 aaKnown RBP eCLIP2.39□□□□□ -2.031e-323■□□□□ 9.9
MALAT1-216ENST00000620465 FGF9P31371 208 aaPredicted RBP2.39□□□□□ -2.03
MALAT1-216ENST00000620465 CHI3L1P36222 383 aaPredicted RBP2.39□□□□□ -2.03
MALAT1-216ENST00000620465 RBMXP38159 391 aaKnown RBP2.39□□□□□ -2.03
MALAT1-216ENST00000620465 RGS4P49798 205 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 HNRNPA3P51991 378 aaKnown RBP2.39□□□□□ -2.03
MALAT1-216ENST00000620465 TLE4Q04727 773 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 SMARCB1Q12824 385 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 PLD1Q13393 1074 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 SNTB2Q13425 540 aaKnown RBP2.39□□□□□ -2.03
MALAT1-216ENST00000620465 SELPLGQ14242 412 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 MESDQ14696 234 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 ARL6IP1Q15041 203 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 GGTA1PQ4G0N0 100 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 NADK2Q4G0N4 442 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 TMEM31Q5JXX7 168 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 MARCH8Q5T0T0 291 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 PYHIN1Q6K0P9 492 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 FAM220AQ7Z4H9 259 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 FAM228AQ86W67 206 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 UBALD2Q8IYN6 164 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 SLC34A3Q8N130 599 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 SVOPLQ8N434 492 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 RNF175Q8N4F7 328 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 CCDC71LQ8N9Z2 235 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 PAQR8Q8TEZ7 354 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 CTNNBL1Q8WYA6 563 aaPredicted RBP2.39□□□□□ -2.03
MALAT1-216ENST00000620465 DCUN1D4Q92564 292 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 RPL3LQ92901 407 aaKnown RBP2.39□□□□□ -2.03
MALAT1-216ENST00000620465 SH3YL1Q96HL8 342 aaPredicted RBP2.39□□□□□ -2.03
MALAT1-216ENST00000620465 TMEM101Q96IK0 257 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 ARHGDIGQ99819 225 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 SPATA16Q9BXB7 569 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 MAGT1Q9H0U3 335 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 MFSD1Q9H3U5 465 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 NARFLQ9H6Q4 476 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 PARVGQ9HBI0 331 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 APMAPQ9HDC9 416 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 DDX19AQ9NUU7 478 aaKnown RBP2.39□□□□□ -2.03
MALAT1-216ENST00000620465 CGNQ9P2M7 1197 aaKnown RBP2.39□□□□□ -2.03
MALAT1-216ENST00000620465 EPS15L1Q9UBC2 864 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 RNF14Q9UBS8 474 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 CHRNA9Q9UGM1 479 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 SH3BGRL2Q9UJC5 107 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 AK6Q9Y3D8 172 aaKnown RBP2.39□□□□□ -2.03
MALAT1-216ENST00000620465 CDH10Q9Y6N8 788 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 DNAH12Q6ZR08 3092 aa2.39□□□□□ -2.03
MALAT1-216ENST00000620465 MIA3Q5JRA6 1907 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 HTTP42858 3142 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 COL4A4P53420 1690 aaPredicted RBP2.38□□□□□ -2.03
MALAT1-216ENST00000620465 IGKV6-21A0A0C4DH24 114 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 A0A0J9YXY3 114 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 VSTM2BA6NLU5 285 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 BTN3A3O00478 584 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 XPO1O14980 1071 aaKnown RBP2.38□□□□□ -2.03
MALAT1-216ENST00000620465 TAPBPO15533 448 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 RS1O15537 224 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 SLC37A4O43826 429 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 UGT2B4P06133 528 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 CLTAP09496 248 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 MCF2P10911 925 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 RPA2P15927 270 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 HNRNPA2B1P22626 353 aaKnown RBP2.38□□□□□ -2.03
MALAT1-216ENST00000620465 UQCRC2P22695 453 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 ADSSP30520 456 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 PPP1R2P41236 205 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 PRRC2AP48634 2157 aaKnown RBP2.38□□□□□ -2.03
MALAT1-216ENST00000620465 PPT1P50897 306 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 HSD17B7P56937 341 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 SNRPFP62306 86 aaKnown RBP2.38□□□□□ -2.03
MALAT1-216ENST00000620465 CBX1P83916 185 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 KLHL30Q0D2K2 578 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 PDCD11Q14690 1871 aaKnown RBP2.38□□□□□ -2.03
MALAT1-216ENST00000620465 SYPL1Q16563 259 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 TRIM16LQ309B1 348 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 TCEAL5Q5H9L2 206 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 PPM1LQ5SGD2 360 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 CROCCQ5TZA2 2017 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 TTC23Q5W5X9 447 aa2.38□□□□□ -2.03
MALAT1-216ENST00000620465 KCNIP4Q6PIL6 250 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms