RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 GMPPAQ96IJ6 420 aaPredicted RBP7.61□□□□□ -1.19
GPC6-202ENST00000617456 CADM1Q9BY67 442 aaKnown RBP7.61□□□□□ -1.19
GPC6-202ENST00000617456 PLSCR4Q9NRQ2 329 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 MED11Q9P086 117 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 COPS3Q9UNS2 423 aa7.61□□□□□ -1.19
GPC6-202ENST00000617456 A0A0G2JMP0 313 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 GJE1A6NN92 205 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 VSTM5A8MXK1 200 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 H3BNH8 94 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 ETV2O00321 342 aaPredicted RBP7.6□□□□□ -1.19
GPC6-202ENST00000617456 CTDSP2O14595 271 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 PIP5K1BO14986 540 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 SLC31A2O15432 143 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 AKAP8O43823 692 aaKnown RBP7.6□□□□□ -1.19
GPC6-202ENST00000617456 GMFGO60234 142 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 AQP8O94778 261 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 AK1P00568 194 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 IFNGP01579 166 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 IGHV2-70P01814 119 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 HMGN2P05204 90 aaKnown RBP7.6□□□□□ -1.19
GPC6-202ENST00000617456 BPGMP07738 259 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 SOD3P08294 240 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 NR2F1P10589 423 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 ME2P23368 584 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 FKBP2P26885 142 aaKnown RBP7.6□□□□□ -1.19
GPC6-202ENST00000617456 MAPK3P27361 379 aaPredicted RBP7.6□□□□□ -1.19
GPC6-202ENST00000617456 DCKP27707 260 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 NR4A2P43354 598 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 SLC6A8P48029 635 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 CTBP2P56545 445 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 CLDN20P56880 219 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 TXNL4AP83876 142 aaKnown RBP7.6□□□□□ -1.19
GPC6-202ENST00000617456 SRSF2Q01130 221 aaKnown RBP7.6□□□□□ -1.19
GPC6-202ENST00000617456 GLO1Q04760 184 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 HSPB3Q12988 150 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 STX5Q13190 355 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 KRR1Q13601 381 aaKnown RBP7.6□□□□□ -1.19
GPC6-202ENST00000617456 TP53BP2Q13625 1128 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 DYRK1AQ13627 763 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 SGCBQ16585 318 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 CTU2Q2VPK5 515 aaKnown RBP7.6□□□□□ -1.19
GPC6-202ENST00000617456 UBE2UQ5VVX9 321 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 ATG16L1Q676U5 607 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 CDC73Q6P1J9 531 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 ZFP1Q6P2D0 407 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 TMEM65Q6PI78 240 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 DEGS2Q6QHC5 323 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 APOOLQ6UXV4 268 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 STAC2Q6ZMT1 411 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 MARCH3Q86UD3 253 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 GPAT4Q86UL3 456 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 ARMC8Q8IUR7 673 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 DDIASQ8IXT1 998 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 COX18Q8N8Q8 333 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 OR8J2Q8NGG1 315 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 OR6K3Q8NGY3 331 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 OR4C3Q8NH37 302 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 NEUROG1Q92886 237 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 FAM120BQ96EK7 910 aaKnown RBP7.6□□□□□ -1.19
GPC6-202ENST00000617456 TSSK3Q96PN8 268 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 LRRC37BQ96QE4 947 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 TMEM246Q9BRR3 403 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 PAPOLGQ9BWT3 736 aaKnown RBP7.6□□□□□ -1.19
GPC6-202ENST00000617456 ACTRT3Q9BYD9 372 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 PRRG4Q9BZD6 226 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 ACTR6Q9GZN1 396 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 SLCO5A1Q9H2Y9 848 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 ENPP5Q9UJA9 477 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 HAO1Q9UJM8 370 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 MCTS1Q9ULC4 181 aaKnown RBP7.6□□□□□ -1.19
GPC6-202ENST00000617456 EMC9Q9Y3B6 208 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 CADP27708 2225 aa7.6□□□□□ -1.19
GPC6-202ENST00000617456 A0A0X1KG70 313 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 TMEM120BA0PK00 339 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 CENPXA8MT69 81 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 CLDN25C9JDP6 229 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 OVOL3O00110 214 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 ANGPT2O15123 496 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 NUPL2O15504 423 aaKnown RBP7.59□□□□□ -1.19
GPC6-202ENST00000617456 GPRIN2O60269 458 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 EIF4E2O60573 245 aaKnown RBP7.59□□□□□ -1.19
GPC6-202ENST00000617456 DNAJA2O60884 412 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 SS18L1O75177 396 aaPredicted RBP7.59□□□□□ -1.19
GPC6-202ENST00000617456 NDUFS7O75251 213 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 PLATP00750 562 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 IGKV1D-16P01601 117 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 S100A8P05109 93 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 CHRNGP07510 517 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 FBP1P09467 338 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 FAM157CP0CG43 387 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 ACP2P11117 423 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 GALP22466 123 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 NR4A1P22736 598 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 PTBP1P26599 531 aaKnown RBP eCLIP7.59□□□□□ -1.192e-6■■■■□ 25.9
GPC6-202ENST00000617456 ANXA11P50995 505 aaKnown RBP7.59□□□□□ -1.19
GPC6-202ENST00000617456 ZNF41P51814 821 aaPredicted RBP7.59□□□□□ -1.19
GPC6-202ENST00000617456 PRKAG1P54619 331 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 CLDN8P56748 225 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 COPZ1P61923 177 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 ETFDHQ16134 617 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms