RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 Q96M85 177 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 TSPAN32Q96QS1 320 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 OR2M2Q96R28 347 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 GPX7Q96SL4 187 aaPredicted RBP13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 PIGMQ9H3S5 423 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 NRIP3Q9NQ35 241 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 TBC1D23Q9NUY8 699 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 PRSS50Q9UI38 385 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 TMEFF2Q9UIK5 374 aaPredicted RBP13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 RCE1Q9Y256 329 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 ADAM18Q9Y3Q7 739 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 PCNX1Q96RV3 2341 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 ARHGAP21Q5T5U3 1957 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 NPIPB13A6NJU9 1138 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 FAM90A27PA6NNH2 459 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 EEF1E1-BLOC1S5C9J1V9 151 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 NPIPB4C9JG80 1138 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 EEF1E1O43324 174 aaKnown RBP13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 SLC43A1O75387 559 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 IGHV3-9P01782 118 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 IGHMP01871 453 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 CD8BP10966 210 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 IGFBP5P24593 272 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 ACVR1BP36896 505 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 ALDH3A2P51648 485 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 RPS6KA3P51812 740 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 CRISP1P54107 249 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 RUNX1T1Q06455 604 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 SRSF1Q07955 248 aaKnown RBP eCLIP13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 RIPK1Q13546 671 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 CDSNQ15517 529 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 ARMC4Q5T2S8 1044 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 TSPO2Q5TGU0 170 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 XKRXQ6PP77 449 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 TFAP2EQ6VUC0 442 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 LUZP2Q86TE4 346 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 PARP8Q8N3A8 854 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 ZNF808Q8N4W9 903 aaPredicted RBP13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 TEX47Q8TBZ9 253 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 CA5BP1Q8WTZ4 195 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 ADAD1Q96M93 576 aaKnown RBP13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 ERMAPQ96PL5 475 aaPredicted RBP13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 USE1Q9NZ43 259 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 GRHPRQ9UBQ7 328 aa13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 DIDO1Q9BTC0 2240 aaKnown RBP13.82□□□□□ -0.2
PCDHGC3-204ENST00000617222 ALPK2Q86TB3 2170 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 A8MXE2 369 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 MSTNO14793 375 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 TRMUO75648 421 aaKnown RBP13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 ATP6V1G2O95670 118 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 ALPLP05186 524 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 ACADSP16219 412 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 PEX2P28328 305 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 LGALS3BPQ08380 585 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 GINS1Q14691 196 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 SLC25A35Q3KQZ1 300 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 SLC35F1Q5T1Q4 408 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 GPR139Q6DWJ6 353 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 ZNF474Q6S9Z5 364 aaPredicted RBP13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 FAM122BQ7Z309 247 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 TMEM123Q8N131 208 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 UBE2J2Q8N2K1 259 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 GALNT4Q8N4A0 578 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 IQCF1Q8N6M8 205 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 ARIH2OSQ8N7S6 290 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 OR4Q3Q8NH05 313 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 RASD2Q96D21 266 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 SLC25A44Q96H78 314 aaPredicted RBP13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 ZNF570Q96NI8 536 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 SLCO5A1Q9H2Y9 848 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 SLC7A10Q9NS82 523 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 UPB1Q9UBR1 384 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 ORC6Q9Y5N6 252 aa13.81□□□□□ -0.2
PCDHGC3-204ENST00000617222 TEX13CA0A0J9YWL9 993 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 A6NIZ1 184 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 M0R3G1 203 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 BHLHE40O14503 412 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 IMPA2O14732 288 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 CASQ2O14958 399 aaPredicted RBP13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 ARPC3O15145 178 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 UPK3AO75631 287 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 KRT33AO76009 404 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 TXNDC12O95881 172 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 IGHG1P01857 330 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 APEHP13798 732 aaKnown RBP13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 AGAP20933 346 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 NOS3P29474 1203 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 SDHAP31040 664 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 POLR2IP36954 125 aaKnown RBP13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 GIPRP48546 466 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 CLRN1P58418 232 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 RAP1BP61224 184 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 ESRRGP62508 458 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 RAP1AP62834 184 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 ZIK1Q3SY52 487 aaPredicted RBP13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 FBXW9Q5XUX1 488 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 FAM205BPQ63HN1 556 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 ACSM5Q6NUN0 579 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 HDDC2Q7Z4H3 204 aa13.8□□□□□ -0.2
PCDHGC3-204ENST00000617222 C20orf196Q8IYI0 205 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms