RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 LINC01590Q5TEZ4 76 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 SLC35D2Q76EJ3 337 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 ESX1Q8N693 406 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 PRSS33Q8NF86 280 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 OR2M3Q8NG83 312 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 TMEM234Q8WY98 164 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 HSD17B8Q92506 261 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 THOC3Q96J01 351 aaKnown RBP7.01□□□□□ -1.29
NEK3-207ENST00000617054 BAIAP2Q9UQB8 552 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 CAB39Q9Y376 341 aaPredicted RBP7.01□□□□□ -1.29
NEK3-207ENST00000617054 CACNA1GO43497 2377 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 CCDC187A0A096LP49 1063 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 DOK2O60496 412 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 SLC16A7O60669 478 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 RFPL3SP0C7P2 107 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 IFNGR1P15260 489 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 DIO1P49895 249 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 POU3F1Q03052 451 aaPredicted RBP7.01□□□□□ -1.29
NEK3-207ENST00000617054 DYNC1I2Q13409 638 aaKnown RBP7.01□□□□□ -1.29
NEK3-207ENST00000617054 DNASE1L3Q13609 305 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 SSPNQ14714 243 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 RNLSQ5VYX0 342 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 PLXDC2Q6UX71 529 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 DPY19L4Q7Z388 723 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 SLC35F2Q8IXU6 374 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 IL22RA1Q8N6P7 574 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 OR6Q1Q8NGQ2 317 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 M1APQ8TC57 530 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 SNX33Q8WV41 574 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 NXPE2Q96DL1 559 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 LIN37Q96GY3 246 aaPredicted RBP7.01□□□□□ -1.29
NEK3-207ENST00000617054 CNN2Q99439 309 aaKnown RBP7.01□□□□□ -1.29
NEK3-207ENST00000617054 PDCD1LG2Q9BQ51 273 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 HES7Q9BYE0 225 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 INIPQ9NRY2 104 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 PLA2G3Q9NZ20 509 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 DNAJC13O75165 2243 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 ZNF407Q9C0G0 2248 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 CEP295Q9C0D2 2601 aa7□□□□□ -1.29
NEK3-207ENST00000617054 IGKV1D-43A0A0B4J1Z2 117 aa7□□□□□ -1.29
NEK3-207ENST00000617054 ANKRD61A6NGH8 418 aa7□□□□□ -1.29
NEK3-207ENST00000617054 METTL15A6NJ78 407 aa7□□□□□ -1.29
NEK3-207ENST00000617054 FTCDNL1E5RQL4 147 aa7□□□□□ -1.29
NEK3-207ENST00000617054 NAGAP17050 411 aa7□□□□□ -1.29
NEK3-207ENST00000617054 MLF1P58340 268 aa7□□□□□ -1.29
NEK3-207ENST00000617054 IFITM3Q01628 133 aa7□□□□□ -1.29
NEK3-207ENST00000617054 TLE3Q04726 772 aa7□□□□□ -1.29
NEK3-207ENST00000617054 HNRNPA0Q13151 305 aaKnown RBP7□□□□□ -1.29
NEK3-207ENST00000617054 TPBGQ13641 420 aa7□□□□□ -1.29
NEK3-207ENST00000617054 SLC22A10Q63ZE4 541 aa7□□□□□ -1.29
NEK3-207ENST00000617054 TMPRSS11AQ6ZMR5 421 aa7□□□□□ -1.29
NEK3-207ENST00000617054 TMEM91Q6ZNR0 172 aa7□□□□□ -1.29
NEK3-207ENST00000617054 LINC00696Q6ZRV3 163 aa7□□□□□ -1.29
NEK3-207ENST00000617054 MISPQ8IVT2 679 aa7□□□□□ -1.29
NEK3-207ENST00000617054 BEST3Q8N1M1 668 aa7□□□□□ -1.29
NEK3-207ENST00000617054 DTX3Q8N9I9 347 aa7□□□□□ -1.29
NEK3-207ENST00000617054 OR6N2Q8NGY6 317 aa7□□□□□ -1.29
NEK3-207ENST00000617054 LIPHQ8WWY8 451 aa7□□□□□ -1.29
NEK3-207ENST00000617054 CDC6Q99741 560 aa7□□□□□ -1.29
NEK3-207ENST00000617054 NMNAT2Q9BZQ4 307 aa7□□□□□ -1.29
NEK3-207ENST00000617054 POLE4Q9NR33 117 aa7□□□□□ -1.29
NEK3-207ENST00000617054 STMN3Q9NZ72 180 aa7□□□□□ -1.29
NEK3-207ENST00000617054 KLHL13Q9P2N7 655 aa7□□□□□ -1.29
NEK3-207ENST00000617054 KLHL21Q9UJP4 597 aa7□□□□□ -1.29
NEK3-207ENST00000617054 NCKAP5O14513 1909 aa7□□□□□ -1.29
NEK3-207ENST00000617054 IRGMA1A4Y4 181 aa7□□□□□ -1.29
NEK3-207ENST00000617054 GABRPO00591 440 aa7□□□□□ -1.29
NEK3-207ENST00000617054 XKRYO14609 159 aa7□□□□□ -1.29
NEK3-207ENST00000617054 TP53I11O14683 189 aa7□□□□□ -1.29
NEK3-207ENST00000617054 AKAP8O43823 692 aaKnown RBP7□□□□□ -1.29
NEK3-207ENST00000617054 DXOO77932 396 aaKnown RBP7□□□□□ -1.29
NEK3-207ENST00000617054 FTH1P19P0C7X4 201 aa7□□□□□ -1.29
NEK3-207ENST00000617054 CTLA4P16410 223 aa7□□□□□ -1.29
NEK3-207ENST00000617054 APOBEC1P41238 236 aaKnown RBP7□□□□□ -1.29
NEK3-207ENST00000617054 SGCBQ16585 318 aa7□□□□□ -1.29
NEK3-207ENST00000617054 TMEM44Q2T9K0 475 aa7□□□□□ -1.29
NEK3-207ENST00000617054 ACER2Q5QJU3 275 aa7□□□□□ -1.29
NEK3-207ENST00000617054 RAET1LQ5VY80 246 aa7□□□□□ -1.29
NEK3-207ENST00000617054 CARD17Q5XLA6 110 aa7□□□□□ -1.29
NEK3-207ENST00000617054 OPN5Q6U736 354 aa7□□□□□ -1.29
NEK3-207ENST00000617054 YRDCQ86U90 279 aaKnown RBP7□□□□□ -1.29
NEK3-207ENST00000617054 THEM6Q8WUY1 208 aa7□□□□□ -1.29
NEK3-207ENST00000617054 PSMF1Q92530 271 aa7□□□□□ -1.29
NEK3-207ENST00000617054 NSMAFQ92636 917 aa7□□□□□ -1.29
NEK3-207ENST00000617054 PELI1Q96FA3 418 aa7□□□□□ -1.29
NEK3-207ENST00000617054 DCBLD2Q96PD2 775 aa7□□□□□ -1.29
NEK3-207ENST00000617054 GPX7Q96SL4 187 aaPredicted RBP7□□□□□ -1.29
NEK3-207ENST00000617054 AMELYQ99218 206 aa7□□□□□ -1.29
NEK3-207ENST00000617054 BSNQ9UPA5 3926 aa7□□□□□ -1.29
NEK3-207ENST00000617054 SLC30A4O14863 429 aa7□□□□□ -1.29
NEK3-207ENST00000617054 RAD1O60671 282 aa7□□□□□ -1.29
NEK3-207ENST00000617054 GLCEO94923 617 aa7□□□□□ -1.29
NEK3-207ENST00000617054 OR8G3PP0DMU2 310 aa7□□□□□ -1.29
NEK3-207ENST00000617054 DPP4P27487 766 aa7□□□□□ -1.29
NEK3-207ENST00000617054 GTF2E2P29084 291 aaKnown RBP7□□□□□ -1.29
NEK3-207ENST00000617054 UGT2B10P36537 528 aa7□□□□□ -1.29
NEK3-207ENST00000617054 PUDPQ08623 228 aa7□□□□□ -1.29
NEK3-207ENST00000617054 CSRP2Q16527 193 aa7□□□□□ -1.29
NEK3-207ENST00000617054 ZNF829Q3KNS6 432 aaPredicted RBP7□□□□□ -1.29
NEK3-207ENST00000617054 TIMM50Q3ZCQ8 353 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms