RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 LSSP48449 732 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 POU3F4P49335 361 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 CEBPGP53567 150 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 NANOS3P60323 173 aaKnown RBP6.11□□□□□ -1.43
LMO3-235ENST00000616247 HTRA4P83105 476 aaPredicted RBP6.11□□□□□ -1.43
LMO3-235ENST00000616247 FABP9Q0Z7S8 132 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 SREBF2Q12772 1141 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 SMAD2Q15796 467 aaKnown RBP6.11□□□□□ -1.43
LMO3-235ENST00000616247 EIF2S3LQ2VIR3 472 aaKnown RBP6.11□□□□□ -1.43
LMO3-235ENST00000616247 EXOSC6Q5RKV6 272 aaKnown RBP6.11□□□□□ -1.43
LMO3-235ENST00000616247 LIPNQ5VXI9 398 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 TBC1D3GQ6DHY5 549 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 TBC1D3CQ6IPX1 549 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 ZNF585AQ6P3V2 769 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 ARHGAP11AQ6P4F7 1023 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 LEG1Q6P5S2 330 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 TMEM205Q6UW68 189 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 NUDT18Q6ZVK8 323 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 USP50Q70EL3 339 aaPredicted RBP6.11□□□□□ -1.43
LMO3-235ENST00000616247 TMEM200AQ86VY9 491 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 DND1Q8IYX4 353 aaKnown RBP6.11□□□□□ -1.43
LMO3-235ENST00000616247 TBC1D3Q8IZP1 549 aaPredicted RBP6.11□□□□□ -1.43
LMO3-235ENST00000616247 BPIFB2Q8N4F0 458 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 PLPP7Q8NBV4 271 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 OR4S1Q8NGB4 309 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 SOCS4Q8WXH5 440 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 NR4A3Q92570 626 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 ISOC2Q96AB3 205 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 WDR34Q96EX3 536 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 CMKLR1Q99788 373 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 SLC46A2Q9BY10 475 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 POTEKPQ9BYX7 375 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 SELENOIQ9C0D9 397 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 GSN-AS1Q9NRJ2 163 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 HCFC1R1Q9NWW0 138 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 OR1A2Q9Y585 309 aa6.11□□□□□ -1.43
LMO3-235ENST00000616247 WASH3PC4AMC7 463 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 ZNF432O94892 652 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 GLSO94925 669 aaPredicted RBP6.1□□□□□ -1.43
LMO3-235ENST00000616247 SERPINA5P05154 406 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 GAAP10253 952 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 DAOP14920 347 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 PGAM2P15259 253 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 RPA2P15927 270 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 CD53P19397 219 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 NME2P22392 152 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 CPT2P23786 658 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 CD80P33681 288 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 WASP42768 502 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 PPP2CBP62714 309 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 SNRPNP63162 240 aaKnown RBP6.1□□□□□ -1.43
LMO3-235ENST00000616247 PPP2CAP67775 309 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 IL13RA1P78552 427 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 S100A12P80511 92 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 JAZF1Q86VZ6 243 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 ETFBKMTQ8IXQ9 262 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 MIB2Q96AX9 1013 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 DTD2Q96FN9 168 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 LCORQ96JN0 433 aaPredicted RBP6.1□□□□□ -1.43
LMO3-235ENST00000616247 COMMD4Q9H0A8 199 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 SYT4Q9H2B2 425 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 PRSS16Q9NQE7 514 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 RXFP3Q9NSD7 469 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 GHRLQ9UBU3 117 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 HELZP42694 1942 aaKnown RBP6.1□□□□□ -1.43
LMO3-235ENST00000616247 TRAV8-7A0A075B6U6 113 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 A0A1B0GWA3 101 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 GGT3PA6NGU5 568 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 OR6C65A6NJZ3 312 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 MCIDASD6RGH6 385 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 H7C417 338 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 J3QRE1 110 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 PQBP1O60828 265 aaKnown RBP6.1□□□□□ -1.43
LMO3-235ENST00000616247 ICOSLGO75144 302 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 ACTL6AO96019 429 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 IFNA6P05013 189 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 ITGB8P26012 769 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 SDHAP31040 664 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 MAP3K8P41279 467 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 NR0B1P51843 470 aaKnown RBP6.1□□□□□ -1.43
LMO3-235ENST00000616247 RPS11P62280 158 aaKnown RBP eCLIP6.1□□□□□ -1.43
LMO3-235ENST00000616247 MRPS10P82664 201 aaKnown RBP6.1□□□□□ -1.43
LMO3-235ENST00000616247 POU4F2Q12837 409 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 MFSD12Q6NUT3 480 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 Q6ZNB5 142 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 ELP5Q8TE02 316 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 ZNRF4Q8WWF5 429 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 SDF2Q99470 211 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 PRSS27Q9BQR3 290 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 TAS2R8Q9NYW2 309 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 MTFP1Q9UDX5 166 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 ABT1Q9ULW3 272 aaKnown RBP6.1□□□□□ -1.43
LMO3-235ENST00000616247 SLC27A6Q9Y2P4 619 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 PPIL1Q9Y3C6 166 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 SDK1Q7Z5N4 2213 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 RTTNQ86VV8 2226 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 TRAV14DV4A0A0A6YYC5 116 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 A0A0A6YYD5 115 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 ZNF736B4DX44 427 aaPredicted RBP6.1□□□□□ -1.43
LMO3-235ENST00000616247 OGG1O15527 345 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms