RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 PCDHGA3Q9Y5H0 932 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 C21orf140B9A014 251 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 HNRNPFP52597 415 aaKnown RBP8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 CLDN15P56746 228 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 EMX1Q04741 257 aaPredicted RBP8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 NFATC3Q12968 1075 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 SLC16A9Q7RTY1 509 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 TPRA1Q86W33 373 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 PTOV1Q86YD1 416 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 GLB1L2Q8IW92 636 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 ABHD5Q8WTS1 349 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 ADAMTS14Q8WXS8 1223 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 SYT3Q9BQG1 590 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF350Q9GZX5 532 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 NUDT15Q9NV35 164 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 DIMT1Q9UNQ2 313 aaKnown RBP8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 UBCP0CG48 685 aaKnown RBP8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF44P15621 663 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 MAKP20794 623 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 MSR1P21757 451 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 MRPL19P49406 292 aaKnown RBP8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 ADARB1P78563 741 aaKnown RBP8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 MRPS10P82664 201 aaKnown RBP8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 FGFBP1Q14512 234 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF766Q5HY98 468 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 EIF5AL1Q6IS14 154 aaKnown RBP8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 LINC00346Q8IVM7 164 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 FOXRED2Q8IWF2 684 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 SPERTQ8NA61 448 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 IL17RDQ8NFM7 739 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 OR2Y1Q8NGV0 311 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 TRPM6Q9BX84 2022 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 METTL9Q9H1A3 318 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 ABCG5Q9H222 651 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 ENPP5Q9UJA9 477 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 TRGV8A0A0C4DH27 118 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 SOCS6O14544 535 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 PRKNO60260 465 aaPredicted RBP8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 DOK2O60496 412 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 TP53P04637 393 aaPredicted RBP8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 PET100P0DJ07 73 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 ABCD3P28288 659 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 POLR2IP36954 125 aaKnown RBP8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 CD97P48960 835 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 EMDP50402 254 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 MECP2P51608 486 aaKnown RBP8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 SNRPGP62308 76 aaKnown RBP8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 SPOCK1Q08629 439 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 SMN1Q16637 294 aaKnown RBP8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 ACER2Q5QJU3 275 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 BEND4Q6ZU67 534 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 KDM8Q8N371 416 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF511Q8NB15 262 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 OR2V1Q8NHB1 315 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 BRIX1Q8TDN6 353 aaKnown RBP8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 CT55Q8WUE5 264 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 CCDC32Q9BV29 185 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 OR11A1Q9GZK7 315 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 SLC38A1Q9H2H9 487 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 OCIAD1Q9NX40 245 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 PSORS1C1Q9UIG5 152 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 FXYD6-FXYD2A0A087WZ82 144 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 A0A1W2PQL4 384 aaPredicted RBP8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 H7C417 338 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 B4GAT1O43505 415 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 SP9P0CG40 484 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 SDHAP31040 664 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 PCBP4P57723 403 aaKnown RBP8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 PSMA6P60900 246 aaKnown RBP8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 SLC14A1Q13336 389 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 SLC22A6Q4U2R8 563 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF620Q6ZNG0 422 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 PRSS41Q7RTY9 318 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 FXYD6Q9H0Q3 95 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 OR51E2Q9H255 320 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 IKZF5Q9H5V7 419 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 GSKIPQ9P0R6 139 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 COA3Q9Y2R0 106 aaPredicted RBP8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 IGHV5-10-1A0A0J9YXX1 117 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 SPAARA0A1B0GVQ0 90 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 C7orf72A4D263 438 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 B4DXG7 233 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF701M0R085 212 aaPredicted RBP8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 C1QAP02745 245 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 EFNA3P52797 238 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 FOXF1Q12946 379 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 KIAA0040Q15053 153 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 MEP1BQ16820 701 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 STPG1Q5TH74 334 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 OR2G6Q5TZ20 316 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 NPSR1Q6W5P4 371 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 ARIH2OSQ8N7S6 290 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 DTX3Q8N9I9 347 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 TXNDC15Q96J42 360 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 PHOX2BQ99453 314 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 UBE2J1Q9Y385 318 aaPredicted RBP8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 B3GALT1Q9Y5Z6 326 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 KIF13BQ9NQT8 1826 aa8.62□□□□□ -1.03
CLTCL1-208ENST00000615606 TRAV6A0A075B6T7 132 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms