RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 FAM69BQ5VUD6 431 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 KIAA0319Q5VV43 1072 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 VASNQ6EMK4 673 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 MFSD4AQ8N468 514 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 FAM26EQ8N5C1 309 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 OR4K13Q8NH42 304 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 GPR87Q9BY21 358 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 UBQLN4Q9NRR5 601 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 IL36AQ9UHA7 158 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 ZNF107Q9UII5 783 aaPredicted RBP8.15□□□□□ -1.1
TTC28-208ENST00000612946 KIAA1324LA8MWY0 1029 aaPredicted RBP8.15□□□□□ -1.1
TTC28-208ENST00000612946 CDRT15L2A8MXV6 281 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 PLGP00747 810 aaPredicted RBP8.15□□□□□ -1.1
TTC28-208ENST00000612946 PCCBP05166 539 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 LIMS3P0CW19 117 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 LIMS4P0CW20 117 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 TSFMP43897 325 aaKnown RBP8.15□□□□□ -1.1
TTC28-208ENST00000612946 TMEM81Q6P7N7 255 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 VCX2Q9H322 139 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 CCDC187A0A096LP49 1063 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 CLDN34H7C241 214 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 PPP1R3DO95685 299 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 ERVPABLB-1P60509 514 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 SLC35A1P78382 337 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 OR52I1Q8NGK6 324 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 PLK3Q9H4B4 646 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 GSX1Q9H4S2 264 aaPredicted RBP8.15□□□□□ -1.1
TTC28-208ENST00000612946 TREX1Q9NSU2 369 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 EOMESO95936 686 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 STAG3L3P0CL85 134 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 MGST1P10620 155 aaKnown RBP8.15□□□□□ -1.1
TTC28-208ENST00000612946 FHITP49789 147 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 CDKN1CP49918 316 aaPredicted RBP8.15□□□□□ -1.1
TTC28-208ENST00000612946 ATP1B3P54709 279 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 HSD17B7P56937 341 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 SLC9A3R2Q15599 337 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 DPPA3Q6W0C5 159 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 SLC16A14Q7RTX9 510 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 FAM3DQ96BQ1 224 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 ZNF534Q76KX8 674 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 APCDD1Q8J025 514 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 OR2AK2Q8NG84 335 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 SPANXA1Q9NS26 97 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 CUTCQ9NTM9 273 aa8.15□□□□□ -1.1
TTC28-208ENST00000612946 IGKV6D-41A0A0C4DH26 115 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 FUT10Q6P4F1 479 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 MBOAT2Q6ZWT7 520 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 CBARPQ8N350 705 aaPredicted RBP8.15□□□□□ -1.11
TTC28-208ENST00000612946 NEURL3Q96EH8 262 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 FAM210BQ96KR6 192 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 B4GALT7Q9UBV7 327 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 AHCTF1Q8WYP5 2266 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 KCNAB3O43448 404 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 OR13C7P0DN81 318 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 DPP4P27487 766 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 GRPRP30550 384 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 OR10J1P30954 320 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 PODNL1Q6PEZ8 512 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 GABRG1Q8N1C3 465 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 RAB7BQ96AH8 199 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 OR10C1Q96KK4 312 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 GPR20Q99678 358 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 HOXB5P09067 269 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 FGF9P31371 208 aaPredicted RBP8.15□□□□□ -1.11
TTC28-208ENST00000612946 TAZQ16635 292 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 TXNRD3NBQ6F5E7 133 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 LCTLQ6UWM7 567 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 MCATQ8IVS2 390 aaKnown RBP8.15□□□□□ -1.11
TTC28-208ENST00000612946 ZDHHC22Q8N966 263 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 GIMAP2Q9UG22 337 aa8.15□□□□□ -1.11
TTC28-208ENST00000612946 BCL9O00512 1426 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 TBC1D3EA0A087X179 549 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 SLC2A1P11166 492 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 GDI1P31150 447 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 PLGLB1Q02325 96 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 SLC10A1Q14973 349 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 OR4C11Q6IEV9 310 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 SYS1Q8N2H4 156 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 LMX1AQ8TE12 382 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 TMED6Q8WW62 240 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 GHSRQ92847 366 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 RBM14Q96PK6 669 aaKnown RBP8.14□□□□□ -1.11
TTC28-208ENST00000612946 LRIT1Q9P2V4 623 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 KIR2DS1A0A191URI9 304 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 K7ERQ8 282 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 KIR2DS4P43632 304 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 KIR2DS1Q14954 304 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 HLA-BQ31612 363 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 TP53I3Q53FA7 332 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 ZNF321PQ8N8H1 164 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 OR5AP2Q8NGF4 316 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 OR5L2Q8NGL0 311 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 OR8D4Q8NGM9 314 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 PIGQQ9BRB3 760 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 SOX7Q9BT81 388 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 ST6GALNAC5Q9BVH7 336 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 TMPRSS13Q9BYE2 586 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 OR52D1Q9H346 318 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 CNIH4Q9P003 139 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 DOCK2Q92608 1830 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms